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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182038446
OHDE01016016
398829
Bacteroidota
CCT
Arg
>WENV182038463
OHDE01017831
289031
Bacteroidota
CAT
Met
>WENV182037904
OHDE01000030
483416
Bacteroidota
CTG
Gln
>WENV182038281
OHDE01004864
118221
Bacteroidota
CAA
Leu
>WENV182038271
OHDE01004303
56493
Bacteroidota
TGA
Ser
>WENV182038406
OHDE01011946
175903
Bacteroidota
GTG
His
>WENV182038523
OHDE01024772
156068
Bacteroidota
TAC
Val
>WENV182038522
OHDE01024772
156068
Bacteroidota
TAC
Val
>WENV182038610
OHDE01044508
157895
Bacteroidota
TAC
Val
>WENV182038350
OHDE01007137
20449
Bacteroidota
GGA
Ser
>WENV182038497
OHDE01022885
175944
Bacteroidota
CAT
Met
>WENV182037886
OHDE01000012
179697
Bacteroidota
TGT
Thr
>WENV182038249
OHDE01003665
398860
Bacteroidota
CTC
Glu
>WENV182038262
OHDE01004006
280451
Bacteroidota
CGT
Thr
>WENV182038251
OHDE01003754
99847
Bacteroidota
GTA
Tyr
>WENV182038222
OHDE01002875
186874
Bacteroidota
CAT
Met
>WENV182037953
OHDE01000103
186874
Bacteroidota
CAT
Met
>WENV182038293
OHDE01005327
186108
Bacteroidota
GTT
Asn
>WENV182038505
OHDE01023100
187400
Bacteroidota
GTT
Asn
>WENV182038164
OHDE01001248
175844
Bacteroidota
GGC
Ala
>WENV182037918
OHDE01000051
183889
Bacteroidota
GGC
Ala
>WENV182038597
OHDE01037843
178134
Bacteroidota
TGG
Pro
>WENV182038501
OHDE01023059
186142
Bacteroidota
GAT
Ile
>WENV182038367
OHDE01008147
398828
Bacteroidota
CCG
Arg
>WENV182038216
OHDE01002430
176192
Bacteroidota
TCT
Arg
>WENV182038287
OHDE01005134
484496
Bacteroidota
TTG
Gln
>WENV182038418
OHDE01013610
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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