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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182039658
OHDG01001115
117741
Bacteroidota
TAG
Leu
>WENV182039395
OHDG01000103
398829
Bacteroidota
CCT
Arg
>WENV182039888
OHDG01007802
175904
Bacteroidota
CGG
Pro
>WENV182039518
OHDG01000356
289031
Bacteroidota
CAT
Met
>WENV182039313
OHDG01000001
280557
Bacteroidota
CAT
Met
>WENV182039474
OHDG01000261
20206
Bacteroidota
GGA
Ser
>WENV182039411
OHDG01000124
483416
Bacteroidota
CTG
Gln
>WENV182039454
OHDG01000199
56493
Bacteroidota
TGA
Ser
>WENV182039576
OHDG01000542
175903
Bacteroidota
GTG
His
>WENV182039707
OHDG01001523
351598
Bacteroidota
CGG
Pro
>WENV182039477
OHDG01000270
351598
Bacteroidota
CGG
Pro
>WENV182039447
OHDG01000175
351598
Bacteroidota
CGG
Pro
>WENV182039775
OHDG01003226
118089
Bacteroidota
TAG
Leu
>WENV182040094
OHDG01041706
203954
Bacteroidota
GTC
Asp
>WENV182039740
OHDG01002319
178907
Bacteroidota
TCT
Arg
>WENV182039638
OHDG01000957
29791
Bacteroidota
GCT
Ser
>WENV182039365
OHDG01000054
182267
Bacteroidota
GTT
Asn
>WENV182039568
OHDG01000524
57807
Bacteroidota
TGA
Ser
>WENV182039458
OHDG01000209
175902
Bacteroidota
GGC
Ala
>WENV182039639
OHDG01000957
398860
Bacteroidota
CTC
Glu
>WENV182039527
OHDG01000373
280451
Bacteroidota
CGT
Thr
>WENV182040124
OHDG01050508
418894
Bacteroidota
TTC
Glu
>WENV182039489
OHDG01000292
99847
Bacteroidota
GTA
Tyr
>WENV182039314
OHDG01000002
99847
Bacteroidota
GTA
Tyr
>WENV182039439
OHDG01000155
186874
Bacteroidota
CAT
Met
>WENV182039522
OHDG01000369
488746
Bacteroidota
CTG
Gln
>WENV182039826
OHDG01005003
280478
Bacteroidota
GCC
Gly
>WENV182039662
OHDG01001139
20766
Bacteroidota
GGA
Ser
>WENV182039692
OHDG01001417
73011
Bacteroidota
CAA
Leu
>WENV182039315
OHDG01000003
480318
Bacteroidota
CTG
Gln
>WENV182039468
OHDG01000245
398828
Bacteroidota
CCG
Arg
>WENV182039768
OHDG01002952
74084
Bacteroidota
CAG
Leu
>WENV182039555
OHDG01000467
176192
Bacteroidota
TCT
Arg
>WENV182039541
OHDG01000422
280446
Bacteroidota
TTT
Lys
>WENV182039486
OHDG01000288
280446
Bacteroidota
TTT
Lys
>WENV182039473
OHDG01000253
280446
Bacteroidota
TTT
Lys
>WENV182039431
OHDG01000147
280446
Bacteroidota
TTT
Lys
>WENV182039399
OHDG01000111
280446
Bacteroidota
TTT
Lys
>WENV182039391
OHDG01000096
484496
Bacteroidota
TTG
Gln
>WENV182039349
OHDG01000039
484496
Bacteroidota
TTG
Gln
>WENV182039931
OHDG01011435
365112
Bacteroidota
TTT
Lys
>WENV182039750
OHDG01002532
398836
Bacteroidota
GCA
Cys
>WENV182039430
OHDG01000144
398836
Bacteroidota
GCA
Cys
>WENV182039384
OHDG01000086
398836
Bacteroidota
GCA
Cys
>WENV182039579
OHDG01000556
170323
Bacteroidota
GGG
Pro
>WENV182039450
OHDG01000186
170323
Bacteroidota
GGG
Pro
>WENV182039348
OHDG01000035
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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