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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182040532
OHDH01002368
406043
Verrucomicrobiota
GCA
Cys
>WENV182040446
OHDH01001116
293125
Verrucomicrobiota
GAA
Phe
>WENV182040334
OHDH01000361
406350
Verrucomicrobiota
TGT
Thr
>WENV182040559
OHDH01002930
148006
Verrucomicrobiota
CAA
Leu
>WENV182040505
OHDH01001842
101600
Verrucomicrobiota
AAG
Leu
>WENV182040363
OHDH01000551
293105
Verrucomicrobiota
CAT
Met
>WENV182040469
OHDH01001357
405901
Verrucomicrobiota
GCC
Gly
>WENV182040441
OHDH01001085
405901
Verrucomicrobiota
GCC
Gly
>WENV182040418
OHDH01000870
483642
Verrucomicrobiota
CCC
Gly
>WENV182040357
OHDH01000526
229220
Verrucomicrobiota
CAT
Met
>WENV182040440
OHDH01001082
8960
Verrucomicrobiota
CGA
Ser
>WENV182040556
OHDH01002857
101463
Verrucomicrobiota
TAA
Leu
>WENV182040325
OHDH01000284
157427
Verrucomicrobiota
GTC
Asp
>WENV182040277
OHDH01000140
293079
Verrucomicrobiota
CGC
Ala
>WENV182040329
OHDH01000314
120352
Verrucomicrobiota
TAG
Leu
>WENV182040355
OHDH01000510
292636
Verrucomicrobiota
>WENV182040417
OHDH01000870
489412
Verrucomicrobiota
TCC
Gly
>WENV182040390
OHDH01000684
298263
Verrucomicrobiota
TTC
Glu
>WENV182040389
OHDH01000684
298263
Verrucomicrobiota
TTC
Glu
>WENV182040361
OHDH01000551
298263
Verrucomicrobiota
TTC
Glu
>WENV182040400
OHDH01000754
293069
Verrucomicrobiota
CTT
Lys
>WENV182040499
OHDH01001726
406336
Verrucomicrobiota
CCT
Arg
>WENV182040632
OHDH01004400
406369
Verrucomicrobiota
CCG
Arg
>WENV182040592
OHDH01003489
406044
Verrucomicrobiota
CTG
Gln
>WENV182040478
OHDH01001416
187556
Verrucomicrobiota
GGG
Pro
>WENV182040362
OHDH01000551
406037
Verrucomicrobiota
GTG
His
>WENV182040323
OHDH01000276
406360
Verrucomicrobiota
GAC
Val
>WENV182040407
OHDH01000789
187548
Verrucomicrobiota
TCT
Arg
>WENV182040399
OHDH01000754
406040
Verrucomicrobiota
CGT
Thr
>WENV182040675
OHDH01005891
57652
Verrucomicrobiota
TGA
Ser
>WENV182040516
OHDH01002071
406039
Verrucomicrobiota
CAC
Val
>WENV182040410
OHDH01000830
75458
Verrucomicrobiota
CAG
Leu
>WENV182040395
OHDH01000719
406368
Verrucomicrobiota
TTG
Gln
>WENV182040280
OHDH01000154
21159
Verrucomicrobiota
GGA
Ser
>WENV182040321
OHDH01000255
101461
Verrucomicrobiota
GTA
Tyr
>WENV182040275
OHDH01000137
293095
Verrucomicrobiota
TTT
Lys
>WENV182040376
OHDH01000596
187561
Verrucomicrobiota
CGG
Pro
>WENV182040439
OHDH01001081
406342
Verrucomicrobiota
CAT
Met
>WENV182040408
OHDH01000821
303305
Verrucomicrobiota
GGC
Ala
>WENV182040463
OHDH01001292
406346
Verrucomicrobiota
TAC
Val
>WENV182040356
OHDH01000510
8938
Verrucomicrobiota
GCT
Ser
>WENV182040447
OHDH01001116
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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