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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182045087
OHDS01012813
280500
Bacillota
TGC
Ala
>WENV182044906
OHDS01002018
405363
Bacillota
GCA
Cys
>WENV182044574
OHDS01000028
290391
Bacillota
TAC
Val
>WENV182044753
OHDS01000367
229015
Bacillota
GTG
His
>WENV182044580
OHDS01000031
179917
Bacillota
CAT
Met
>WENV182045023
OHDS01006204
280492
Bacillota
CTT
Lys
>WENV182045001
OHDS01004492
175842
Bacillota
CAC
Val
>WENV182044952
OHDS01002793
175842
Bacillota
CAC
Val
>WENV182044965
OHDS01003271
184497
Bacillota
GGG
Pro
>WENV182044888
OHDS01001700
190476
Bacillota
CAT
Met
>WENV182044875
OHDS01001408
190476
Bacillota
CAT
Met
>WENV182044695
OHDS01000188
73664
Bacillota
CAG
Leu
>WENV182044849
OHDS01001051
280447
Bacillota
GAC
Val
>WENV182044811
OHDS01000719
280447
Bacillota
GAC
Val
>WENV182044770
OHDS01000446
280447
Bacillota
GAC
Val
>WENV182044956
OHDS01002837
5692
Bacillota
GCT
Ser
>WENV182044848
OHDS01001051
5692
Bacillota
GCT
Ser
>WENV182044577
OHDS01000031
284723
Bacillota
TAC
Val
>WENV182044872
OHDS01001277
73009
Bacillota
CAG
Leu
>WENV182044799
OHDS01000609
73009
Bacillota
CAG
Leu
>WENV182044756
OHDS01000379
73009
Bacillota
CAG
Leu
>WENV182044745
OHDS01000337
73009
Bacillota
CAG
Leu
>WENV182044789
OHDS01000538
291581
Bacillota
CGG
Pro
>WENV182045101
OHDS01016061
175859
Bacillota
TCT
Arg
>WENV182044897
OHDS01001864
175859
Bacillota
TCT
Arg
>WENV182045016
OHDS01005676
280436
Bacillota
TGC
Ala
>WENV182044560
OHDS01000013
290325
Bacillota
GCC
Gly
>WENV182044864
OHDS01001203
179810
Bacillota
TCT
Arg
>WENV182044752
OHDS01000367
179810
Bacillota
TCT
Arg
>WENV182044982
OHDS01003797
480322
Bacillota
CTG
Gln
>WENV182044746
OHDS01000340
480322
Bacillota
CTG
Gln
>WENV182045009
OHDS01005203
175868
Bacillota
GTT
Asn
>WENV182044984
OHDS01003844
175868
Bacillota
GTT
Asn
>WENV182044754
OHDS01000372
175868
Bacillota
GTT
Asn
>WENV182045008
OHDS01005203
398854
Bacillota
CTC
Glu
>WENV182044983
OHDS01003844
398854
Bacillota
CTC
Glu
>WENV182044674
OHDS01000162
291576
Bacillota
CCC
Gly
>WENV182044842
OHDS01000965
480324
Bacillota
TTG
Gln
>WENV182044737
OHDS01000318
480324
Bacillota
TTG
Gln
>WENV182044797
OHDS01000607
497729
Bacillota
CCA
Trp
>WENV182045121
OHDS01020264
398857
Bacillota
TTC
Glu
>WENV182044787
OHDS01000527
280444
Bacillota
GGT
Thr
>WENV182044783
OHDS01000527
280444
Bacillota
GGT
Thr
>WENV182045061
OHDS01008896
179755
Bacillota
CCG
Arg
>WENV182044889
OHDS01001700
398832
Bacillota
TTC
Glu
>WENV182044876
OHDS01001408
398832
Bacillota
TTC
Glu
>WENV182044602
OHDS01000045
118669
Bacillota
GTA
Tyr
>WENV182044548
OHDS01000007
118669
Bacillota
GTA
Tyr
>WENV182044852
OHDS01001138
280476
Bacillota
TTT
Lys
>WENV182044568
OHDS01000022
398852
Bacillota
CTC
Glu
>WENV182044567
OHDS01000022
398852
Bacillota
CTC
Glu
>WENV182044566
OHDS01000022
398852
Bacillota
CTC
Glu
>WENV182045030
OHDS01006779
280483
Bacillota
GAA
Phe
>WENV182044865
OHDS01001203
175857
Bacillota
GTG
His
>WENV182045031
OHDS01006779
285756
Bacillota
GCC
Gly
>WENV182044775
OHDS01000471
398833
Bacillota
TGT
Thr
>WENV182044786
OHDS01000527
175849
Bacillota
GTC
Asp
>WENV182044955
OHDS01002837
56074
Bacillota
TGA
Ser
>WENV182044847
OHDS01001051
56074
Bacillota
TGA
Ser
>WENV182045033
OHDS01007076
280473
Bacillota
TGG
Pro
>WENV182044919
OHDS01002178
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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