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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182050355
OHEE01005166
280500
Bacillota
TGC
Ala
>WENV182050377
OHEE01010714
291579
Bacillota
GAA
Phe
>WENV182050274
OHEE01001178
291629
Bacillota
CCA
Trp
>WENV182050365
OHEE01006882
236579
Bacillota
GAT
Ile
>WENV182050146
OHEE01000289
348419
Bacillota
GTT
Asn
>WENV182050154
OHEE01000314
184497
Bacillota
GGG
Pro
>WENV182050079
OHEE01000114
179176
Bacillota
ACG
Arg
>WENV182049978
OHEE01000017
184687
Bacillota
CAT
Met
>WENV182050387
OHEE01014044
73664
Bacillota
CAG
Leu
>WENV182050272
OHEE01001170
312274
Bacillota
GGC
Ala
>WENV182050267
OHEE01001099
186123
Bacillota
GTC
Asp
>WENV182049977
OHEE01000017
284723
Bacillota
TAC
Val
>WENV182050263
OHEE01001076
481217
Bacillota
GCA
Cys
>WENV182050289
OHEE01001542
407726
Bacillota
CTG
Gln
>WENV182050247
OHEE01000926
407726
Bacillota
CTG
Gln
>WENV182050101
OHEE01000173
407726
Bacillota
CTG
Gln
>WENV182050069
OHEE01000103
398835
Bacillota
GCC
Gly
>WENV182050303
OHEE01001885
290325
Bacillota
GCC
Gly
>WENV182050254
OHEE01001001
332181
Bacillota
TGT
Thr
>WENV182050268
OHEE01001099
291634
Bacillota
GAA
Phe
>WENV182050140
OHEE01000258
346451
Bacillota
TTT
Lys
>WENV182050368
OHEE01008100
295350
Bacillota
TGC
Ala
>WENV182050381
OHEE01011362
314834
Bacillota
TGC
Ala
>WENV182050160
OHEE01000351
497729
Bacillota
CCA
Trp
>WENV182050132
OHEE01000234
497729
Bacillota
CCA
Trp
>WENV182050088
OHEE01000131
497729
Bacillota
CCA
Trp
>WENV182050070
OHEE01000105
73638
Bacillota
AAG
Leu
>WENV182050212
OHEE01000585
323864
Bacillota
TGC
Ala
>WENV182050345
OHEE01004130
175911
Bacillota
GTC
Asp
>WENV182050328
OHEE01002998
292374
Bacillota
TGC
Ala
>WENV182050269
OHEE01001113
398857
Bacillota
TTC
Glu
>WENV182050078
OHEE01000114
46835
Bacillota
TAA
Leu
>WENV182050229
OHEE01000670
52748
Bacillota
TGA
Ser
>WENV182050327
OHEE01002998
201856
Bacillota
GAT
Ile
>WENV182050324
OHEE01002573
285601
Bacillota
TTC
Glu
>WENV182050317
OHEE01002393
280486
Bacillota
TGC
Ala
>WENV182050291
OHEE01001587
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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