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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182051910
OHEG01020251
179231
Actinomycetota
TAC
Val
>WENV182051997
OHEG01030229
175883
Actinomycetota
GAT
Ile
>WENV182051828
OHEG01011351
140768
Actinomycetota
TAG
Leu
>WENV182051799
OHEG01009769
280441
Actinomycetota
CCG
Arg
>WENV182051850
OHEG01013307
176638
Actinomycetota
GGG
Pro
>WENV182051906
OHEG01020114
280524
Actinomycetota
TGC
Ala
>WENV182052104
OHEG01056428
280523
Actinomycetota
GGC
Ala
>WENV182051739
OHEG01007082
20205
Actinomycetota
GCT
Ser
>WENV182051723
OHEG01006266
280450
Actinomycetota
TTT
Lys
>WENV182052068
OHEG01042040
480329
Actinomycetota
CCC
Gly
>WENV182051875
OHEG01015875
99865
Actinomycetota
CAG
Leu
>WENV182052067
OHEG01041707
480319
Actinomycetota
TTG
Gln
>WENV182051783
OHEG01008497
280489
Actinomycetota
CTC
Glu
>WENV182051784
OHEG01008497
398853
Actinomycetota
CTG
Gln
>WENV182052087
OHEG01050236
175843
Actinomycetota
CAA
Leu
>WENV182051922
OHEG01021384
46642
Actinomycetota
CGA
Ser
>WENV182052062
OHEG01040868
117903
Actinomycetota
GTA
Tyr
>WENV182051888
OHEG01017775
147796
Actinomycetota
TAA
Leu
>WENV182051827
OHEG01011351
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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