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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182071321
OHFL01014435
510477
Bacillota
TCC
Gly
>WENV182071357
OHFL01019388
99852
Bacillota
GTA
Tyr
>WENV182071150
OHFL01003158
343590
Bacillota
GCC
Gly
>WENV182071112
OHFL01002258
404076
Bacillota
GCC
Gly
>WENV182071347
OHFL01017926
280500
Bacillota
TGC
Ala
>WENV182071111
OHFL01002258
184504
Bacillota
GTC
Asp
>WENV182070992
OHFL01000828
405363
Bacillota
GCA
Cys
>WENV182070802
OHFL01000175
280492
Bacillota
CTT
Lys
>WENV182070770
OHFL01000115
280492
Bacillota
CTT
Lys
>WENV182071122
OHFL01002405
175842
Bacillota
CAC
Val
>WENV182071098
OHFL01001878
175842
Bacillota
CAC
Val
>WENV182070823
OHFL01000233
175842
Bacillota
CAC
Val
>WENV182071362
OHFL01020262
179176
Bacillota
ACG
Arg
>WENV182071206
OHFL01006184
404079
Bacillota
CAT
Met
>WENV182070786
OHFL01000135
73664
Bacillota
CAG
Leu
>WENV182070991
OHFL01000780
280447
Bacillota
GAC
Val
>WENV182070829
OHFL01000239
280447
Bacillota
GAC
Val
>WENV182071193
OHFL01005248
5692
Bacillota
GCT
Ser
>WENV182071125
OHFL01002440
5692
Bacillota
GCT
Ser
>WENV182070884
OHFL01000360
5692
Bacillota
GCT
Ser
>WENV182071339
OHFL01017129
186123
Bacillota
GTC
Asp
>WENV182071182
OHFL01004735
73009
Bacillota
CAG
Leu
>WENV182071130
OHFL01002508
73009
Bacillota
CAG
Leu
>WENV182071158
OHFL01003382
291581
Bacillota
CGG
Pro
>WENV182071065
OHFL01001421
291581
Bacillota
CGG
Pro
>WENV182071049
OHFL01001272
175859
Bacillota
TCT
Arg
>WENV182071106
OHFL01002159
175831
Bacillota
ACG
Arg
>WENV182071420
OHFL01034099
353153
Bacillota
TGC
Ala
>WENV182071116
OHFL01002277
183957
Bacillota
CCT
Arg
>WENV182071068
OHFL01001435
346451
Bacillota
TTT
Lys
>WENV182071157
OHFL01003382
480322
Bacillota
CTG
Gln
>WENV182071064
OHFL01001421
480322
Bacillota
CTG
Gln
>WENV182071059
OHFL01001386
480322
Bacillota
CTG
Gln
>WENV182071187
OHFL01004976
187364
Bacillota
CAT
Met
>WENV182070999
OHFL01000855
175868
Bacillota
GTT
Asn
>WENV182071473
OHFL01048347
314834
Bacillota
TGC
Ala
>WENV182070803
OHFL01000176
398854
Bacillota
CTC
Glu
>WENV182070984
OHFL01000749
291576
Bacillota
CCC
Gly
>WENV182071000
OHFL01000857
480324
Bacillota
TTG
Gln
>WENV182070993
OHFL01000828
480324
Bacillota
TTG
Gln
>WENV182071475
OHFL01049642
497729
Bacillota
CCA
Trp
>WENV182071021
OHFL01001035
497729
Bacillota
CCA
Trp
>WENV182070702
OHFL01000022
56079
Bacillota
AAG
Leu
>WENV182071245
OHFL01007787
323864
Bacillota
TGC
Ala
>WENV182070994
OHFL01000842
204381
Bacillota
GAT
Ile
>WENV182070781
OHFL01000131
117745
Bacillota
GTA
Tyr
>WENV182071249
OHFL01007892
280444
Bacillota
GGT
Thr
>WENV182071162
OHFL01003619
483485
Bacillota
CCC
Gly
>WENV182071149
OHFL01003119
46643
Bacillota
TGA
Ser
>WENV182071003
OHFL01000884
179755
Bacillota
CCG
Arg
>WENV182071188
OHFL01004986
25955
Bacillota
GCT
Ser
>WENV182070793
OHFL01000150
118669
Bacillota
GTA
Tyr
>WENV182070887
OHFL01000380
280462
Bacillota
GAA
Phe
>WENV182070986
OHFL01000755
398852
Bacillota
CTC
Glu
>WENV182070925
OHFL01000512
398852
Bacillota
CTC
Glu
>WENV182070916
OHFL01000491
398852
Bacillota
CTC
Glu
>WENV182070915
OHFL01000491
398852
Bacillota
CTC
Glu
>WENV182070914
OHFL01000491
398852
Bacillota
CTC
Glu
>WENV182070845
OHFL01000285
398852
Bacillota
CTC
Glu
>WENV182070782
OHFL01000131
398852
Bacillota
CTC
Glu
>WENV182071455
OHFL01042530
201856
Bacillota
GAT
Ile
>WENV182071028
OHFL01001077
289123
Bacillota
GGT
Thr
>WENV182071322
OHFL01014435
184539
Bacillota
TCT
Arg
>WENV182071223
OHFL01007017
280483
Bacillota
GAA
Phe
>WENV182071304
OHFL01012650
406186
Bacillota
CTC
Glu
>WENV182070952
OHFL01000652
285601
Bacillota
TTC
Glu
>WENV182070872
OHFL01000354
285601
Bacillota
TTC
Glu
>WENV182070863
OHFL01000334
175857
Bacillota
GTG
His
>WENV182071224
OHFL01007017
285756
Bacillota
GCC
Gly
>WENV182070856
OHFL01000321
398833
Bacillota
TGT
Thr
>WENV182071290
OHFL01011247
175849
Bacillota
GTC
Asp
>WENV182070888
OHFL01000380
280463
Bacillota
TTT
Lys
>WENV182070944
OHFL01000601
405393
Bacillota
GCC
Gly
>WENV182071192
OHFL01005248
56074
Bacillota
TGA
Ser
>WENV182071124
OHFL01002440
56074
Bacillota
TGA
Ser
>WENV182070883
OHFL01000360
56074
Bacillota
TGA
Ser
>WENV182071019
OHFL01001018
482078
Bacillota
CCC
Gly
>WENV182071256
OHFL01008423
280473
Bacillota
TGG
Pro
>WENV182071089
OHFL01001660
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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