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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182075891
OHFR01040430
404226
Bacteroidota
CCT
Arg
>WENV182075241
OHFR01000012
400161
Bacteroidota
GGT
Thr
>WENV182075691
OHFR01008178
289031
Bacteroidota
CAT
Met
>WENV182075354
OHFR01000321
156422
Bacteroidota
TAC
Val
>WENV182075697
OHFR01008813
280557
Bacteroidota
CAT
Met
>WENV182075817
OHFR01023445
483416
Bacteroidota
CTG
Gln
>WENV182075261
OHFR01000029
118221
Bacteroidota
CAA
Leu
>WENV182075242
OHFR01000012
283316
Bacteroidota
CCA
Trp
>WENV182075263
OHFR01000030
56385
Bacteroidota
TGA
Ser
>WENV182075563
OHFR01002486
56072
Bacteroidota
TAA
Leu
>WENV182075754
OHFR01014245
57807
Bacteroidota
TGA
Ser
>WENV182075727
OHFR01011560
175902
Bacteroidota
GGC
Ala
>WENV182075324
OHFR01000179
404109
Bacteroidota
CTC
Glu
>WENV182075323
OHFR01000179
404109
Bacteroidota
CTC
Glu
>WENV182075235
OHFR01000008
46648
Bacteroidota
TAA
Leu
>WENV182075507
OHFR01001548
332896
Bacteroidota
TTT
Lys
>WENV182075250
OHFR01000021
187814
Bacteroidota
GTC
Asp
>WENV182075237
OHFR01000008
481328
Bacteroidota
TTG
Gln
>WENV182075715
OHFR01010402
280446
Bacteroidota
TTT
Lys
>WENV182075883
OHFR01037964
484496
Bacteroidota
TTG
Gln
>WENV182075593
OHFR01003165
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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