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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182076468
OHFV01004174
99852
Bacillota
GTA
Tyr
>WENV182076226
OHFV01000444
343590
Bacillota
GCC
Gly
>WENV182076566
OHFV01010905
280500
Bacillota
TGC
Ala
>WENV182076242
OHFV01000519
349107
Bacillota
GCC
Gly
>WENV182076243
OHFV01000519
405363
Bacillota
GCA
Cys
>WENV182076241
OHFV01000519
280428
Bacillota
GAA
Phe
>WENV182076350
OHFV01001238
284746
Bacillota
CTG
Gln
>WENV182076310
OHFV01000908
175842
Bacillota
CAC
Val
>WENV182076088
OHFV01000028
348419
Bacillota
GTT
Asn
>WENV182076230
OHFV01000480
190476
Bacillota
CAT
Met
>WENV182076376
OHFV01001699
280447
Bacillota
GAC
Val
>WENV182076245
OHFV01000529
280447
Bacillota
GAC
Val
>WENV182076187
OHFV01000274
5692
Bacillota
GCT
Ser
>WENV182076323
OHFV01001001
359682
Bacillota
TAC
Val
>WENV182076361
OHFV01001357
73009
Bacillota
CAG
Leu
>WENV182076250
OHFV01000562
291581
Bacillota
CGG
Pro
>WENV182076359
OHFV01001357
175859
Bacillota
TCT
Arg
>WENV182076318
OHFV01000970
21311
Bacillota
GCT
Ser
>WENV182076377
OHFV01001705
175831
Bacillota
ACG
Arg
>WENV182076268
OHFV01000655
179810
Bacillota
TCT
Arg
>WENV182076119
OHFV01000099
284627
Bacillota
GAA
Phe
>WENV182076142
OHFV01000166
293309
Bacillota
GTT
Asn
>WENV182076253
OHFV01000583
27216
Bacillota
GCT
Ser
>WENV182076320
OHFV01000978
480322
Bacillota
CTG
Gln
>WENV182076249
OHFV01000562
480322
Bacillota
CTG
Gln
>WENV182076289
OHFV01000771
175868
Bacillota
GTT
Asn
>WENV182076274
OHFV01000669
284744
Bacillota
TTT
Lys
>WENV182076517
OHFV01006242
398854
Bacillota
CTC
Glu
>WENV182076408
OHFV01002275
291576
Bacillota
CCC
Gly
>WENV182076200
OHFV01000318
480324
Bacillota
TTG
Gln
>WENV182076181
OHFV01000253
497729
Bacillota
CCA
Trp
>WENV182076472
OHFV01004432
323864
Bacillota
TGC
Ala
>WENV182076321
OHFV01001001
179935
Bacillota
GTC
Asp
>WENV182076194
OHFV01000288
280444
Bacillota
GGT
Thr
>WENV182076192
OHFV01000288
280444
Bacillota
GGT
Thr
>WENV182076280
OHFV01000696
179755
Bacillota
CCG
Arg
>WENV182076275
OHFV01000669
401111
Bacillota
TTC
Glu
>WENV182076564
OHFV01010611
46835
Bacillota
TAA
Leu
>WENV182076322
OHFV01001001
284742
Bacillota
GAA
Phe
>WENV182076231
OHFV01000480
398832
Bacillota
TTC
Glu
>WENV182076183
OHFV01000260
118669
Bacillota
GTA
Tyr
>WENV182076563
OHFV01010611
175915
Bacillota
GTC
Asp
>WENV182076156
OHFV01000193
280476
Bacillota
TTT
Lys
>WENV182076567
OHFV01011103
398852
Bacillota
CTC
Glu
>WENV182076269
OHFV01000655
175857
Bacillota
GTG
His
>WENV182076293
OHFV01000796
398833
Bacillota
TGT
Thr
>WENV182076191
OHFV01000288
175849
Bacillota
GTC
Asp
>WENV182076559
OHFV01010066
280486
Bacillota
TGC
Ala
>WENV182076186
OHFV01000274
56074
Bacillota
TGA
Ser
>WENV182076378
OHFV01001712
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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