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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182077913
OHFY01000080
117741
Bacteroidota
TAG
Leu
>WENV182077820
OHFY01000007
398829
Bacteroidota
CCT
Arg
>WENV182077926
OHFY01000105
398829
Bacteroidota
CCT
Arg
>WENV182077962
OHFY01000184
289031
Bacteroidota
CAT
Met
>WENV182077894
OHFY01000052
280553
Bacteroidota
TTT
Lys
>WENV182077932
OHFY01000122
280553
Bacteroidota
TTT
Lys
>WENV182078294
OHFY01010334
280553
Bacteroidota
TTT
Lys
>WENV182078034
OHFY01000471
280557
Bacteroidota
CAT
Met
>WENV182077959
OHFY01000180
20492
Bacteroidota
GGA
Ser
>WENV182077844
OHFY01000022
20206
Bacteroidota
GGA
Ser
>WENV182078301
OHFY01011118
483416
Bacteroidota
CTG
Gln
>WENV182077817
OHFY01000005
56493
Bacteroidota
TGA
Ser
>WENV182077818
OHFY01000005
175903
Bacteroidota
GTG
His
>WENV182077930
OHFY01000121
29791
Bacteroidota
GCT
Ser
>WENV182078247
OHFY01005503
20449
Bacteroidota
GGA
Ser
>WENV182078267
OHFY01007409
21127
Bacteroidota
GGA
Ser
>WENV182077879
OHFY01000035
57807
Bacteroidota
TGA
Ser
>WENV182077874
OHFY01000034
175902
Bacteroidota
GGC
Ala
>WENV182077931
OHFY01000121
398860
Bacteroidota
CTC
Glu
>WENV182077922
OHFY01000096
280451
Bacteroidota
CGT
Thr
>WENV182078053
OHFY01000584
99847
Bacteroidota
GTA
Tyr
>WENV182077958
OHFY01000179
99847
Bacteroidota
GTA
Tyr
>WENV182077814
OHFY01000001
99847
Bacteroidota
GTA
Tyr
>WENV182077982
OHFY01000241
186874
Bacteroidota
CAT
Met
>WENV182077842
OHFY01000021
175844
Bacteroidota
GGC
Ala
>WENV182078349
OHFY01019448
183889
Bacteroidota
GGC
Ala
>WENV182078368
OHFY01023094
480318
Bacteroidota
CTG
Gln
>WENV182077828
OHFY01000011
398828
Bacteroidota
CCG
Arg
>WENV182077910
OHFY01000076
484496
Bacteroidota
TTG
Gln
>WENV182078378
OHFY01026539
285750
Bacteroidota
CCC
Gly
>WENV182077915
OHFY01000085
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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