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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182082441
OHGL01000200
117741
Bacteroidota
TAG
Leu
>WENV182082321
OHGL01000008
398829
Bacteroidota
CCT
Arg
>WENV182082386
OHGL01000068
398829
Bacteroidota
CCT
Arg
>WENV182082519
OHGL01000573
175838
Bacteroidota
GTT
Asn
>WENV182082520
OHGL01000573
175838
Bacteroidota
GTT
Asn
>WENV182082649
OHGL01004103
280557
Bacteroidota
CAT
Met
>WENV182082470
OHGL01000301
20206
Bacteroidota
GGA
Ser
>WENV182082349
OHGL01000028
175903
Bacteroidota
GTG
His
>WENV182082491
OHGL01000422
351598
Bacteroidota
CGG
Pro
>WENV182082399
OHGL01000095
351598
Bacteroidota
CGG
Pro
>WENV182082583
OHGL01001481
175936
Bacteroidota
CAT
Met
>WENV182082384
OHGL01000065
29791
Bacteroidota
GCT
Ser
>WENV182082471
OHGL01000302
57807
Bacteroidota
TGA
Ser
>WENV182082366
OHGL01000045
57807
Bacteroidota
TGA
Ser
>WENV182082328
OHGL01000012
57807
Bacteroidota
TGA
Ser
>WENV182082369
OHGL01000047
175902
Bacteroidota
GGC
Ala
>WENV182082385
OHGL01000065
398860
Bacteroidota
CTC
Glu
>WENV182082494
OHGL01000431
480404
Bacteroidota
TTG
Gln
>WENV182082361
OHGL01000041
280451
Bacteroidota
CGT
Thr
>WENV182082389
OHGL01000070
99847
Bacteroidota
GTA
Tyr
>WENV182082309
OHGL01000001
99847
Bacteroidota
GTA
Tyr
>WENV182082318
OHGL01000005
332896
Bacteroidota
TTT
Lys
>WENV182082315
OHGL01000004
332896
Bacteroidota
TTT
Lys
>WENV182082445
OHGL01000212
488746
Bacteroidota
CTG
Gln
>WENV182082672
OHGL01006349
399026
Bacteroidota
CCT
Arg
>WENV182082787
OHGL01025554
280532
Bacteroidota
>WENV182082512
OHGL01000535
229246
Bacteroidota
GGC
Ala
>WENV182082460
OHGL01000277
480318
Bacteroidota
CTG
Gln
>WENV182082497
OHGL01000454
158068
Bacteroidota
GGG
Pro
>WENV182082377
OHGL01000054
158068
Bacteroidota
GGG
Pro
>WENV182082347
OHGL01000024
158068
Bacteroidota
GGG
Pro
>WENV182082393
OHGL01000082
398828
Bacteroidota
CCG
Arg
>WENV182082458
OHGL01000271
176192
Bacteroidota
TCT
Arg
>WENV182082570
OHGL01001181
484496
Bacteroidota
TTG
Gln
>WENV182082387
OHGL01000069
484496
Bacteroidota
TTG
Gln
>WENV182082322
OHGL01000009
484496
Bacteroidota
TTG
Gln
>WENV182082663
OHGL01005039
117804
Bacteroidota
TAG
Leu
>WENV182082538
OHGL01000741
398836
Bacteroidota
GCA
Cys
>WENV182082314
OHGL01000003
398836
Bacteroidota
GCA
Cys
>WENV182082584
OHGL01001513
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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