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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182085321
OHGR01016227
280500
Bacillota
TGC
Ala
>WENV182085015
OHGR01000716
280428
Bacillota
GAA
Phe
>WENV182084887
OHGR01000097
179917
Bacillota
CAT
Met
>WENV182084947
OHGR01000313
280492
Bacillota
CTT
Lys
>WENV182085213
OHGR01006144
175842
Bacillota
CAC
Val
>WENV182085174
OHGR01004402
179563
Bacillota
GAT
Ile
>WENV182085219
OHGR01006518
280447
Bacillota
GAC
Val
>WENV182085371
OHGR01023556
186123
Bacillota
GTC
Asp
>WENV182085301
OHGR01013797
73009
Bacillota
CAG
Leu
>WENV182085138
OHGR01003257
175859
Bacillota
TCT
Arg
>WENV182085136
OHGR01003212
175831
Bacillota
ACG
Arg
>WENV182085072
OHGR01001642
480322
Bacillota
CTG
Gln
>WENV182085115
OHGR01002678
175868
Bacillota
GTT
Asn
>WENV182085106
OHGR01002493
322848
Bacillota
CTT
Lys
>WENV182085059
OHGR01001353
398854
Bacillota
CTC
Glu
>WENV182085149
OHGR01003606
480324
Bacillota
TTG
Gln
>WENV182085375
OHGR01024734
497729
Bacillota
CCA
Trp
>WENV182085395
OHGR01033598
303718
Bacillota
TGT
Thr
>WENV182084971
OHGR01000406
56079
Bacillota
AAG
Leu
>WENV182085398
OHGR01033685
292374
Bacillota
TGC
Ala
>WENV182085307
OHGR01014538
398857
Bacillota
TTC
Glu
>WENV182085041
OHGR01001180
280444
Bacillota
GGT
Thr
>WENV182085042
OHGR01001182
46643
Bacillota
TGA
Ser
>WENV182085394
OHGR01032686
179755
Bacillota
CCG
Arg
>WENV182085049
OHGR01001277
398832
Bacillota
TTC
Glu
>WENV182085034
OHGR01001093
280462
Bacillota
GAA
Phe
>WENV182085107
OHGR01002500
398852
Bacillota
CTC
Glu
>WENV182085397
OHGR01033685
201856
Bacillota
GAT
Ile
>WENV182085315
OHGR01015374
285756
Bacillota
GCC
Gly
>WENV182085192
OHGR01005167
398833
Bacillota
TGT
Thr
>WENV182085040
OHGR01001180
175849
Bacillota
GTC
Asp
>WENV182085035
OHGR01001093
280463
Bacillota
TTT
Lys
>WENV182085289
OHGR01012917
405393
Bacillota
GCC
Gly
>WENV182085178
OHGR01004637
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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