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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182086151
OHGT01000748
348419
Bacillota
GTT
Asn
>WENV182086079
OHGT01000322
179176
Bacillota
ACG
Arg
>WENV182086356
OHGT01004540
295166
Bacillota
TGC
Ala
>WENV182086527
OHGT01026287
215243
Bacillota
CAT
Met
>WENV182086490
OHGT01018416
186123
Bacillota
GTC
Asp
>WENV182086238
OHGT01001444
284723
Bacillota
TAC
Val
>WENV182086312
OHGT01002662
290325
Bacillota
GCC
Gly
>WENV182086491
OHGT01018416
291634
Bacillota
GAA
Phe
>WENV182086413
OHGT01007875
346451
Bacillota
TTT
Lys
>WENV182086515
OHGT01022315
187364
Bacillota
CAT
Met
>WENV182086332
OHGT01003276
497729
Bacillota
CCA
Trp
>WENV182085985
OHGT01000057
497729
Bacillota
CCA
Trp
>WENV182086365
OHGT01005237
303718
Bacillota
TGT
Thr
>WENV182086512
OHGT01020966
292374
Bacillota
TGC
Ala
>WENV182086323
OHGT01002948
204381
Bacillota
GAT
Ile
>WENV182086482
OHGT01017099
58120
Bacillota
AAG
Leu
>WENV182086042
OHGT01000189
280476
Bacillota
TTT
Lys
>WENV182086511
OHGT01020966
201856
Bacillota
GAT
Ile
>WENV182086450
OHGT01012951
317820
Bacillota
TAC
Val
>WENV182086039
OHGT01000189
179166
Bacillota
TCT
Arg
>WENV182086475
OHGT01015548
280486
Bacillota
TGC
Ala
>WENV182086415
OHGT01007947
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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