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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182086830
OHGU01012866
99852
Bacillota
GTA
Tyr
>WENV182086926
OHGU01027397
280500
Bacillota
TGC
Ala
>WENV182086831
OHGU01013018
290391
Bacillota
TAC
Val
>WENV182086886
OHGU01021453
280466
Bacillota
TAC
Val
>WENV182086652
OHGU01000763
175842
Bacillota
CAC
Val
>WENV182086710
OHGU01003125
295166
Bacillota
TGC
Ala
>WENV182086813
OHGU01010276
284506
Bacillota
CCA
Trp
>WENV182086892
OHGU01022721
73664
Bacillota
CAG
Leu
>WENV182086889
OHGU01022098
280447
Bacillota
GAC
Val
>WENV182086897
OHGU01023226
5692
Bacillota
GCT
Ser
>WENV182086672
OHGU01001124
73009
Bacillota
CAG
Leu
>WENV182086716
OHGU01003352
291581
Bacillota
CGG
Pro
>WENV182086670
OHGU01001124
175859
Bacillota
TCT
Arg
>WENV182086843
OHGU01014719
398835
Bacillota
GCC
Gly
>WENV182086772
OHGU01006298
21311
Bacillota
GCT
Ser
>WENV182086867
OHGU01018217
175831
Bacillota
ACG
Arg
>WENV182086633
OHGU01000410
284627
Bacillota
GAA
Phe
>WENV182086692
OHGU01001832
294020
Bacillota
TAC
Val
>WENV182086681
OHGU01001446
187364
Bacillota
CAT
Met
>WENV182086742
OHGU01004629
175868
Bacillota
GTT
Asn
>WENV182086741
OHGU01004629
398854
Bacillota
CTC
Glu
>WENV182086799
OHGU01008656
291576
Bacillota
CCC
Gly
>WENV182086646
OHGU01000680
186051
Bacillota
GAT
Ile
>WENV182086762
OHGU01005726
280444
Bacillota
GGT
Thr
>WENV182086617
OHGU01000230
483485
Bacillota
CCC
Gly
>WENV182086707
OHGU01003054
179755
Bacillota
CCG
Arg
>WENV182086787
OHGU01007906
398832
Bacillota
TTC
Glu
>WENV182086694
OHGU01001832
118669
Bacillota
GTA
Tyr
>WENV182086661
OHGU01000977
118669
Bacillota
GTA
Tyr
>WENV182086708
OHGU01003110
398852
Bacillota
CTC
Glu
>WENV182086861
OHGU01017685
285601
Bacillota
TTC
Glu
>WENV182086761
OHGU01005726
175849
Bacillota
GTC
Asp
>WENV182086740
OHGU01004538
280486
Bacillota
TGC
Ala
>WENV182086896
OHGU01023226
56074
Bacillota
TGA
Ser
>WENV182086810
OHGU01009486
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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