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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182088331
OHGX01005632
343590
Bacillota
GCC
Gly
>WENV182088417
OHGX01014401
280500
Bacillota
TGC
Ala
>WENV182088169
OHGX01001152
280428
Bacillota
GAA
Phe
>WENV182088453
OHGX01020669
179917
Bacillota
CAT
Met
>WENV182088397
OHGX01011223
175842
Bacillota
CAC
Val
>WENV182088496
OHGX01031039
291629
Bacillota
CCA
Trp
>WENV182088357
OHGX01007278
179176
Bacillota
ACG
Arg
>WENV182088048
OHGX01000375
406553
Bacillota
TTG
Gln
>WENV182088209
OHGX01001812
190476
Bacillota
CAT
Met
>WENV182088463
OHGX01022494
280447
Bacillota
GAC
Val
>WENV182088458
OHGX01021506
5692
Bacillota
GCT
Ser
>WENV182088402
OHGX01012092
186123
Bacillota
GTC
Asp
>WENV182088412
OHGX01013664
73009
Bacillota
CAG
Leu
>WENV182088479
OHGX01025842
280646
Bacillota
TGC
Ala
>WENV182088515
OHGX01037007
332181
Bacillota
TGT
Thr
>WENV182088355
OHGX01007183
322848
Bacillota
CTT
Lys
>WENV182088354
OHGX01007183
398854
Bacillota
CTC
Glu
>WENV182088248
OHGX01002662
497729
Bacillota
CCA
Trp
>WENV182088252
OHGX01002767
56079
Bacillota
AAG
Leu
>WENV182088469
OHGX01023787
323864
Bacillota
TGC
Ala
>WENV182087980
OHGX01000159
398857
Bacillota
TTC
Glu
>WENV182088494
OHGX01030153
179755
Bacillota
CCG
Arg
>WENV182088210
OHGX01001812
398832
Bacillota
TTC
Glu
>WENV182088438
OHGX01017660
118669
Bacillota
GTA
Tyr
>WENV182088258
OHGX01003120
280462
Bacillota
GAA
Phe
>WENV182088243
OHGX01002562
398852
Bacillota
CTC
Glu
>WENV182088466
OHGX01023142
280463
Bacillota
TTT
Lys
>WENV182088457
OHGX01021506
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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