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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182096659
OHHN01019245
483642
Verrucomicrobiota
CCC
Gly
>WENV182096676
OHHN01021709
229220
Verrucomicrobiota
CAT
Met
>WENV182096668
OHHN01020469
8960
Verrucomicrobiota
CGA
Ser
>WENV182096627
OHHN01014235
157427
Verrucomicrobiota
GTC
Asp
>WENV182096620
OHHN01014069
292636
Verrucomicrobiota
>WENV182096664
OHHN01019658
298263
Verrucomicrobiota
TTC
Glu
>WENV182096619
OHHN01014058
406336
Verrucomicrobiota
CCT
Arg
>WENV182096681
OHHN01024431
406369
Verrucomicrobiota
CCG
Arg
>WENV182096631
OHHN01015151
405940
Verrucomicrobiota
GGT
Thr
>WENV182096637
OHHN01016203
406037
Verrucomicrobiota
GTG
His
>WENV182096564
OHHN01009301
406360
Verrucomicrobiota
GAC
Val
>WENV182096717
OHHN01034941
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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