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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182104804
OHIB01003661
343590
Bacillota
GCC
Gly
>WENV182104941
OHIB01015345
280500
Bacillota
TGC
Ala
>WENV182104595
OHIB01000590
405363
Bacillota
GCA
Cys
>WENV182104337
OHIB01000012
280428
Bacillota
GAA
Phe
>WENV182104866
OHIB01006661
229015
Bacillota
GTG
His
>WENV182104864
OHIB01006477
302145
Bacillota
GAA
Phe
>WENV182104641
OHIB01000867
280492
Bacillota
CTT
Lys
>WENV182104631
OHIB01000841
280492
Bacillota
CTT
Lys
>WENV182104374
OHIB01000029
175842
Bacillota
CAC
Val
>WENV182104855
OHIB01005855
236579
Bacillota
GAT
Ile
>WENV182104974
OHIB01027865
289474
Bacillota
CCA
Trp
>WENV182104854
OHIB01005855
295166
Bacillota
TGC
Ala
>WENV182104366
OHIB01000026
190476
Bacillota
CAT
Met
>WENV182104371
OHIB01000029
280447
Bacillota
GAC
Val
>WENV182104364
OHIB01000020
280447
Bacillota
GAC
Val
>WENV182104335
OHIB01000012
280427
Bacillota
TAC
Val
>WENV182104520
OHIB01000300
73009
Bacillota
CAG
Leu
>WENV182104612
OHIB01000696
291581
Bacillota
CGG
Pro
>WENV182104396
OHIB01000046
175859
Bacillota
TCT
Arg
>WENV182104369
OHIB01000026
175831
Bacillota
ACG
Arg
>WENV182104938
OHIB01014895
510876
Bacillota
GGT
Thr
>WENV182104511
OHIB01000271
284627
Bacillota
GAA
Phe
>WENV182104611
OHIB01000696
480322
Bacillota
CTG
Gln
>WENV182104306
OHIB01000004
480322
Bacillota
CTG
Gln
>WENV182104410
OHIB01000062
175868
Bacillota
GTT
Asn
>WENV182104393
OHIB01000039
175868
Bacillota
GTT
Asn
>WENV182104392
OHIB01000039
398854
Bacillota
CTC
Glu
>WENV182104594
OHIB01000590
480324
Bacillota
TTG
Gln
>WENV182104699
OHIB01001190
497729
Bacillota
CCA
Trp
>WENV182104492
OHIB01000199
497729
Bacillota
CCA
Trp
>WENV182104766
OHIB01002229
56079
Bacillota
AAG
Leu
>WENV182104496
OHIB01000208
46643
Bacillota
TGA
Ser
>WENV182104776
OHIB01002444
179755
Bacillota
CCG
Arg
>WENV182104368
OHIB01000026
179755
Bacillota
CCG
Arg
>WENV182104758
OHIB01002093
46835
Bacillota
TAA
Leu
>WENV182104367
OHIB01000026
398832
Bacillota
TTC
Glu
>WENV182104596
OHIB01000593
118669
Bacillota
GTA
Tyr
>WENV182104560
OHIB01000421
398852
Bacillota
CTC
Glu
>WENV182104527
OHIB01000335
398852
Bacillota
CTC
Glu
>WENV182104535
OHIB01000368
398833
Bacillota
TGT
Thr
>WENV182105005
OHIB01037812
280486
Bacillota
TGC
Ala
>WENV182104362
OHIB01000020
56074
Bacillota
TGA
Ser
>WENV182104372
OHIB01000029
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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