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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182105137
OHIC01000109
295385
Bacteroidota
CCA
Trp
>WENV182105118
OHIC01000093
285360
Bacteroidota
TTT
Lys
>WENV182105136
OHIC01000108
117741
Bacteroidota
TAG
Leu
>WENV182105210
OHIC01000269
398829
Bacteroidota
CCT
Arg
>WENV182105181
OHIC01000178
175838
Bacteroidota
GTT
Asn
>WENV182105204
OHIC01000249
289031
Bacteroidota
CAT
Met
>WENV182105168
OHIC01000161
289031
Bacteroidota
CAT
Met
>WENV182105151
OHIC01000123
280557
Bacteroidota
CAT
Met
>WENV182105292
OHIC01000525
20206
Bacteroidota
GGA
Ser
>WENV182105023
OHIC01000007
483416
Bacteroidota
CTG
Gln
>WENV182105165
OHIC01000158
175903
Bacteroidota
GTG
His
>WENV182105226
OHIC01000305
398872
Bacteroidota
GGT
Thr
>WENV182105034
OHIC01000010
405877
Bacteroidota
GGT
Thr
>WENV182105011
OHIC01000001
21127
Bacteroidota
GGA
Ser
>WENV182105438
OHIC01001465
57807
Bacteroidota
TGA
Ser
>WENV182105285
OHIC01000515
57807
Bacteroidota
TGA
Ser
>WENV182105177
OHIC01000171
57807
Bacteroidota
TGA
Ser
>WENV182105143
OHIC01000117
175902
Bacteroidota
GGC
Ala
>WENV182105305
OHIC01000585
398860
Bacteroidota
CTC
Glu
>WENV182105107
OHIC01000069
480404
Bacteroidota
TTG
Gln
>WENV182105422
OHIC01001246
280451
Bacteroidota
CGT
Thr
>WENV182105145
OHIC01000118
99847
Bacteroidota
GTA
Tyr
>WENV182105101
OHIC01000062
99847
Bacteroidota
GTA
Tyr
>WENV182105063
OHIC01000026
186874
Bacteroidota
CAT
Met
>WENV182105166
OHIC01000160
332896
Bacteroidota
TTT
Lys
>WENV182105394
OHIC01001094
488746
Bacteroidota
CTG
Gln
>WENV182105081
OHIC01000035
158068
Bacteroidota
GGG
Pro
>WENV182105189
OHIC01000213
398828
Bacteroidota
CCG
Arg
>WENV182105083
OHIC01000037
159415
Bacteroidota
TAC
Val
>WENV182105100
OHIC01000061
176192
Bacteroidota
TCT
Arg
>WENV182105122
OHIC01000096
280446
Bacteroidota
TTT
Lys
>WENV182105082
OHIC01000035
280446
Bacteroidota
TTT
Lys
>WENV182105182
OHIC01000178
484496
Bacteroidota
TTG
Gln
>WENV182105188
OHIC01000211
398836
Bacteroidota
GCA
Cys
>WENV182105180
OHIC01000177
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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