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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182108545
OHIM01000031
400161
Bacteroidota
GGT
Thr
>WENV182108770
OHIM01000980
289031
Bacteroidota
CAT
Met
>WENV182108722
OHIM01000583
156422
Bacteroidota
TAC
Val
>WENV182108658
OHIM01000295
280553
Bacteroidota
TTT
Lys
>WENV182108909
OHIM01004270
280553
Bacteroidota
TTT
Lys
>WENV182108685
OHIM01000385
280557
Bacteroidota
CAT
Met
>WENV182108741
OHIM01000759
280557
Bacteroidota
CAT
Met
>WENV182108662
OHIM01000298
20206
Bacteroidota
GGA
Ser
>WENV182108716
OHIM01000509
483416
Bacteroidota
CTG
Gln
>WENV182108598
OHIM01000137
118221
Bacteroidota
CAA
Leu
>WENV182108568
OHIM01000061
56493
Bacteroidota
TGA
Ser
>WENV182108761
OHIM01000910
175903
Bacteroidota
GTG
His
>WENV182108991
OHIM01007796
156068
Bacteroidota
TAC
Val
>WENV182109155
OHIM01029426
280530
Bacteroidota
CCA
Trp
>WENV182108526
OHIM01000007
56385
Bacteroidota
TGA
Ser
>WENV182109198
OHIM01038797
178133
Bacteroidota
GAT
Ile
>WENV182108775
OHIM01001012
56072
Bacteroidota
TAA
Leu
>WENV182108570
OHIM01000065
57807
Bacteroidota
TGA
Ser
>WENV182108830
OHIM01001760
175902
Bacteroidota
GGC
Ala
>WENV182108990
OHIM01007604
280451
Bacteroidota
CGT
Thr
>WENV182108914
OHIM01004484
99847
Bacteroidota
GTA
Tyr
>WENV182108647
OHIM01000271
99847
Bacteroidota
GTA
Tyr
>WENV182108637
OHIM01000218
404109
Bacteroidota
CTC
Glu
>WENV182108636
OHIM01000218
404109
Bacteroidota
CTC
Glu
>WENV182108633
OHIM01000197
186874
Bacteroidota
CAT
Met
>WENV182108522
OHIM01000006
46648
Bacteroidota
TAA
Leu
>WENV182108582
OHIM01000096
20766
Bacteroidota
GGA
Ser
>WENV182108784
OHIM01001114
187814
Bacteroidota
GTC
Asp
>WENV182108520
OHIM01000005
187814
Bacteroidota
GTC
Asp
>WENV182108718
OHIM01000527
398828
Bacteroidota
CCG
Arg
>WENV182108621
OHIM01000168
398828
Bacteroidota
CCG
Arg
>WENV182109200
OHIM01038807
176192
Bacteroidota
TCT
Arg
>WENV182108521
OHIM01000006
481328
Bacteroidota
TTG
Gln
>WENV182108577
OHIM01000086
484496
Bacteroidota
TTG
Gln
>WENV182109152
OHIM01028699
285750
Bacteroidota
CCC
Gly
>WENV182108614
OHIM01000153
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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