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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182111337
OHIR01019999
179231
Actinomycetota
TAC
Val
>WENV182111272
OHIR01012764
176499
Actinomycetota
CAT
Met
>WENV182111282
OHIR01013589
140768
Actinomycetota
TAG
Leu
>WENV182111319
OHIR01017559
175837
Actinomycetota
ACG
Arg
>WENV182111320
OHIR01017559
175837
Actinomycetota
ACG
Arg
>WENV182111339
OHIR01021300
280441
Actinomycetota
CCG
Arg
>WENV182111445
OHIR01049307
291585
Actinomycetota
GCC
Gly
>WENV182111292
OHIR01014238
280523
Actinomycetota
GGC
Ala
>WENV182111313
OHIR01016970
175872
Actinomycetota
GTC
Asp
>WENV182111254
OHIR01010629
280450
Actinomycetota
TTT
Lys
>WENV182111334
OHIR01019197
480329
Actinomycetota
CCC
Gly
>WENV182111437
OHIR01047897
280489
Actinomycetota
CTC
Glu
>WENV182111438
OHIR01047897
398853
Actinomycetota
CTG
Gln
>WENV182111209
OHIR01007402
175843
Actinomycetota
CAA
Leu
>WENV182111273
OHIR01012797
46642
Actinomycetota
CGA
Ser
>WENV182111271
OHIR01012764
117903
Actinomycetota
GTA
Tyr
>WENV182111269
OHIR01012636
56071
Actinomycetota
TGA
Ser
>WENV182111398
OHIR01035698
147796
Actinomycetota
TAA
Leu
>WENV182111281
OHIR01013589
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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