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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182112470
OHIU01011188
99852
Bacillota
GTA
Tyr
>WENV182112518
OHIU01015636
280500
Bacillota
TGC
Ala
>WENV182112658
OHIU01043099
405363
Bacillota
GCA
Cys
>WENV182112093
OHIU01000486
290391
Bacillota
TAC
Val
>WENV182112218
OHIU01001286
179917
Bacillota
CAT
Met
>WENV182112621
OHIU01030812
302145
Bacillota
GAA
Phe
>WENV182112475
OHIU01011548
175842
Bacillota
CAC
Val
>WENV182112261
OHIU01002016
291629
Bacillota
CCA
Trp
>WENV182112161
OHIU01000729
179176
Bacillota
ACG
Arg
>WENV182112262
OHIU01002035
280447
Bacillota
GAC
Val
>WENV182112580
OHIU01023118
5692
Bacillota
GCT
Ser
>WENV182112367
OHIU01005065
312274
Bacillota
GGC
Ala
>WENV182112521
OHIU01016087
186123
Bacillota
GTC
Asp
>WENV182112500
OHIU01013306
175825
Bacillota
GAT
Ile
>WENV182112018
OHIU01000217
284723
Bacillota
TAC
Val
>WENV182112182
OHIU01000931
73009
Bacillota
CAG
Leu
>WENV182112650
OHIU01041769
175859
Bacillota
TCT
Arg
>WENV182112499
OHIU01013306
280436
Bacillota
TGC
Ala
>WENV182112237
OHIU01001571
175831
Bacillota
ACG
Arg
>WENV182112620
OHIU01030812
187589
Bacillota
CAT
Met
>WENV182112522
OHIU01016087
291634
Bacillota
GAA
Phe
>WENV182112517
OHIU01015636
175916
Bacillota
GAT
Ile
>WENV182112479
OHIU01011757
480322
Bacillota
CTG
Gln
>WENV182112493
OHIU01013154
175868
Bacillota
GTT
Asn
>WENV182112492
OHIU01013154
398854
Bacillota
CTC
Glu
>WENV182112300
OHIU01002896
480324
Bacillota
TTG
Gln
>WENV182112346
OHIU01004096
303718
Bacillota
TGT
Thr
>WENV182112568
OHIU01021726
323864
Bacillota
TGC
Ala
>WENV182111920
OHIU01000007
398857
Bacillota
TTC
Glu
>WENV182112573
OHIU01022013
280444
Bacillota
GGT
Thr
>WENV182112435
OHIU01008492
46643
Bacillota
TGA
Ser
>WENV182112312
OHIU01003302
179755
Bacillota
CCG
Arg
>WENV182112252
OHIU01001904
398832
Bacillota
TTC
Glu
>WENV182112263
OHIU01002071
280476
Bacillota
TTT
Lys
>WENV182112661
OHIU01043431
280462
Bacillota
GAA
Phe
>WENV182112096
OHIU01000486
285756
Bacillota
GCC
Gly
>WENV182112553
OHIU01019645
398833
Bacillota
TGT
Thr
>WENV182112260
OHIU01002016
405393
Bacillota
GCC
Gly
>WENV182112579
OHIU01023118
56074
Bacillota
TGA
Ser
>WENV182112419
OHIU01007420
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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