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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182113009
OHIX01000306
117741
Bacteroidota
TAG
Leu
>WENV182113015
OHIX01000349
398829
Bacteroidota
CCT
Arg
>WENV182113189
OHIX01002454
175838
Bacteroidota
GTT
Asn
>WENV182113475
OHIX01018037
175838
Bacteroidota
GTT
Asn
>WENV182112944
OHIX01000123
400161
Bacteroidota
GGT
Thr
>WENV182113400
OHIX01011045
289031
Bacteroidota
CAT
Met
>WENV182112964
OHIX01000181
156422
Bacteroidota
TAC
Val
>WENV182113369
OHIX01009027
280557
Bacteroidota
CAT
Met
>WENV182113378
OHIX01009906
483416
Bacteroidota
CTG
Gln
>WENV182113213
OHIX01003135
483416
Bacteroidota
CTG
Gln
>WENV182112961
OHIX01000166
118221
Bacteroidota
CAA
Leu
>WENV182113146
OHIX01001817
56493
Bacteroidota
TGA
Ser
>WENV182113245
OHIX01004162
175903
Bacteroidota
GTG
His
>WENV182113362
OHIX01008321
351598
Bacteroidota
CGG
Pro
>WENV182112965
OHIX01000181
172085
Bacteroidota
TAC
Val
>WENV182112887
OHIX01000067
56385
Bacteroidota
TGA
Ser
>WENV182113415
OHIX01012805
20449
Bacteroidota
GGA
Ser
>WENV182112945
OHIX01000123
312035
Bacteroidota
CCA
Trp
>WENV182113010
OHIX01000311
242241
Bacteroidota
GTC
Asp
>WENV182113164
OHIX01002035
56072
Bacteroidota
TAA
Leu
>WENV182113285
OHIX01005144
280451
Bacteroidota
CGT
Thr
>WENV182113446
OHIX01015443
418894
Bacteroidota
TTC
Glu
>WENV182113180
OHIX01002266
99847
Bacteroidota
GTA
Tyr
>WENV182112937
OHIX01000107
404109
Bacteroidota
CTC
Glu
>WENV182112938
OHIX01000107
404109
Bacteroidota
CTC
Glu
>WENV182113335
OHIX01007188
186874
Bacteroidota
CAT
Met
>WENV182112825
OHIX01000018
46648
Bacteroidota
TAA
Leu
>WENV182113057
OHIX01000686
183889
Bacteroidota
GGC
Ala
>WENV182113292
OHIX01005398
398828
Bacteroidota
CCG
Arg
>WENV182112827
OHIX01000018
481328
Bacteroidota
TTG
Gln
>WENV182113195
OHIX01002566
69204
Bacteroidota
TGA
Ser
>WENV182113284
OHIX01005039
280446
Bacteroidota
TTT
Lys
>WENV182112947
OHIX01000129
484496
Bacteroidota
TTG
Gln
>WENV182113178
OHIX01002219
27502
Bacteroidota
GGA
Ser
>WENV182113349
OHIX01008080
398836
Bacteroidota
GCA
Cys
>WENV182113052
OHIX01000649
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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