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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182119112
OHJH01011194
99852
Bacillota
GTA
Tyr
>WENV182119129
OHJH01012887
234991
Bacillota
GAT
Ile
>WENV182119115
OHJH01011657
280500
Bacillota
TGC
Ala
>WENV182119186
OHJH01025298
405363
Bacillota
GCA
Cys
>WENV182119238
OHJH01048236
290391
Bacillota
TAC
Val
>WENV182119058
OHJH01005473
229015
Bacillota
GTG
His
>WENV182119128
OHJH01012887
295166
Bacillota
TGC
Ala
>WENV182118976
OHJH01000749
280447
Bacillota
GAC
Val
>WENV182118968
OHJH01000465
5692
Bacillota
GCT
Ser
>WENV182119130
OHJH01013500
186123
Bacillota
GTC
Asp
>WENV182118982
OHJH01001053
291581
Bacillota
CGG
Pro
>WENV182119166
OHJH01018418
175859
Bacillota
TCT
Arg
>WENV182119054
OHJH01005340
175831
Bacillota
ACG
Arg
>WENV182119131
OHJH01013500
291634
Bacillota
GAA
Phe
>WENV182118981
OHJH01001053
480322
Bacillota
CTG
Gln
>WENV182119089
OHJH01008355
175868
Bacillota
GTT
Asn
>WENV182119088
OHJH01008355
398854
Bacillota
CTC
Glu
>WENV182118979
OHJH01000907
291576
Bacillota
CCC
Gly
>WENV182118984
OHJH01001076
480324
Bacillota
TTG
Gln
>WENV182119091
OHJH01008451
303718
Bacillota
TGT
Thr
>WENV182119173
OHJH01019951
186051
Bacillota
GAT
Ile
>WENV182119024
OHJH01002640
280444
Bacillota
GGT
Thr
>WENV182119015
OHJH01002197
179755
Bacillota
CCG
Arg
>WENV182119108
OHJH01010547
289123
Bacillota
GGT
Thr
>WENV182119241
OHJH01048236
285756
Bacillota
GCC
Gly
>WENV182119023
OHJH01002640
175849
Bacillota
GTC
Asp
>WENV182118967
OHJH01000465
56074
Bacillota
TGA
Ser
>WENV182118978
OHJH01000882
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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