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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182124107
OHJQ01002500
510477
Bacillota
TCC
Gly
>WENV182123789
OHJQ01000150
349107
Bacillota
GCC
Gly
>WENV182124068
OHJQ01001617
349107
Bacillota
GCC
Gly
>WENV182123726
OHJQ01000080
280428
Bacillota
GAA
Phe
>WENV182124061
OHJQ01001508
179917
Bacillota
CAT
Met
>WENV182124268
OHJQ01009619
280492
Bacillota
CTT
Lys
>WENV182124200
OHJQ01005683
175842
Bacillota
CAC
Val
>WENV182123805
OHJQ01000170
175842
Bacillota
CAC
Val
>WENV182123901
OHJQ01000445
291629
Bacillota
CCA
Trp
>WENV182124163
OHJQ01004184
184497
Bacillota
GGG
Pro
>WENV182123825
OHJQ01000208
184497
Bacillota
GGG
Pro
>WENV182123854
OHJQ01000288
179176
Bacillota
ACG
Arg
>WENV182123717
OHJQ01000075
184687
Bacillota
CAT
Met
>WENV182123943
OHJQ01000660
215243
Bacillota
CAT
Met
>WENV182123837
OHJQ01000242
190476
Bacillota
CAT
Met
>WENV182123793
OHJQ01000155
73664
Bacillota
CAG
Leu
>WENV182123925
OHJQ01000570
280447
Bacillota
GAC
Val
>WENV182123856
OHJQ01000289
280447
Bacillota
GAC
Val
>WENV182123858
OHJQ01000289
5692
Bacillota
GCT
Ser
>WENV182124115
OHJQ01002589
312274
Bacillota
GGC
Ala
>WENV182123881
OHJQ01000362
73009
Bacillota
CAG
Leu
>WENV182123695
OHJQ01000057
481217
Bacillota
GCA
Cys
>WENV182123962
OHJQ01000728
407726
Bacillota
CTG
Gln
>WENV182123841
OHJQ01000244
291581
Bacillota
CGG
Pro
>WENV182123820
OHJQ01000189
175859
Bacillota
TCT
Arg
>WENV182124218
OHJQ01006826
398835
Bacillota
GCC
Gly
>WENV182123865
OHJQ01000310
398835
Bacillota
GCC
Gly
>WENV182124004
OHJQ01001002
175831
Bacillota
ACG
Arg
>WENV182123702
OHJQ01000068
332181
Bacillota
TGT
Thr
>WENV182123784
OHJQ01000140
346451
Bacillota
TTT
Lys
>WENV182123840
OHJQ01000244
480322
Bacillota
CTG
Gln
>WENV182123732
OHJQ01000081
480322
Bacillota
CTG
Gln
>WENV182124223
OHJQ01007246
187364
Bacillota
CAT
Met
>WENV182124160
OHJQ01004034
175868
Bacillota
GTT
Asn
>WENV182124148
OHJQ01003659
398854
Bacillota
CTC
Glu
>WENV182123693
OHJQ01000056
291576
Bacillota
CCC
Gly
>WENV182124430
OHJQ01039276
480324
Bacillota
TTG
Gln
>WENV182124109
OHJQ01002520
400963
Bacillota
GTT
Asn
>WENV182124261
OHJQ01009135
497729
Bacillota
CCA
Trp
>WENV182124011
OHJQ01001066
497729
Bacillota
CCA
Trp
>WENV182123932
OHJQ01000603
303718
Bacillota
TGT
Thr
>WENV182123800
OHJQ01000162
73638
Bacillota
AAG
Leu
>WENV182124157
OHJQ01003753
56079
Bacillota
AAG
Leu
>WENV182124279
OHJQ01010279
175911
Bacillota
GTC
Asp
>WENV182124242
OHJQ01007812
292374
Bacillota
TGC
Ala
>WENV182123759
OHJQ01000107
204381
Bacillota
GAT
Ile
>WENV182123886
OHJQ01000379
117745
Bacillota
GTA
Tyr
>WENV182124041
OHJQ01001325
280444
Bacillota
GGT
Thr
>WENV182123895
OHJQ01000411
317482
Bacillota
TAC
Val
>WENV182124206
OHJQ01006344
179755
Bacillota
CCG
Arg
>WENV182124025
OHJQ01001217
179755
Bacillota
CCG
Arg
>WENV182123838
OHJQ01000242
398832
Bacillota
TTC
Glu
>WENV182123904
OHJQ01000452
25955
Bacillota
GCT
Ser
>WENV182123798
OHJQ01000158
52748
Bacillota
TGA
Ser
>WENV182123869
OHJQ01000322
280476
Bacillota
TTT
Lys
>WENV182124089
OHJQ01001894
280462
Bacillota
GAA
Phe
>WENV182124241
OHJQ01007812
201856
Bacillota
GAT
Ile
>WENV182123705
OHJQ01000068
289123
Bacillota
GGT
Thr
>WENV182124478
OHJQ01058653
298260
Bacillota
GTT
Asn
>WENV182123899
OHJQ01000429
285601
Bacillota
TTC
Glu
>WENV182123906
OHJQ01000474
398833
Bacillota
TGT
Thr
>WENV182124040
OHJQ01001325
175849
Bacillota
GTC
Asp
>WENV182124090
OHJQ01001894
280463
Bacillota
TTT
Lys
>WENV182124076
OHJQ01001718
179166
Bacillota
TCT
Arg
>WENV182124445
OHJQ01046909
280486
Bacillota
TGC
Ala
>WENV182123653
OHJQ01000009
405393
Bacillota
GCC
Gly
>WENV182124448
OHJQ01048030
56074
Bacillota
TGA
Ser
>WENV182124262
OHJQ01009183
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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