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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182135723
OHKJ01002396
406043
Verrucomicrobiota
GCA
Cys
>WENV182135658
OHKJ01001118
293125
Verrucomicrobiota
GAA
Phe
>WENV182135568
OHKJ01000507
406350
Verrucomicrobiota
TGT
Thr
>WENV182135770
OHKJ01003666
148006
Verrucomicrobiota
CAA
Leu
>WENV182135754
OHKJ01003116
293105
Verrucomicrobiota
CAT
Met
>WENV182135583
OHKJ01000564
405901
Verrucomicrobiota
GCC
Gly
>WENV182135622
OHKJ01000763
483642
Verrucomicrobiota
CCC
Gly
>WENV182135706
OHKJ01002041
8960
Verrucomicrobiota
CGA
Ser
>WENV182135870
OHKJ01007600
101463
Verrucomicrobiota
TAA
Leu
>WENV182135473
OHKJ01000175
157427
Verrucomicrobiota
GTC
Asp
>WENV182135633
OHKJ01000873
293079
Verrucomicrobiota
CGC
Ala
>WENV182135707
OHKJ01002042
292636
Verrucomicrobiota
>WENV182135567
OHKJ01000499
293069
Verrucomicrobiota
CTT
Lys
>WENV182135815
OHKJ01004936
406336
Verrucomicrobiota
CCT
Arg
>WENV182135851
OHKJ01006621
406369
Verrucomicrobiota
CCG
Arg
>WENV182135618
OHKJ01000747
405940
Verrucomicrobiota
GGT
Thr
>WENV182135813
OHKJ01004841
406044
Verrucomicrobiota
CTG
Gln
>WENV182135530
OHKJ01000375
187556
Verrucomicrobiota
GGG
Pro
>WENV182135732
OHKJ01002592
406037
Verrucomicrobiota
GTG
His
>WENV182135856
OHKJ01007118
406360
Verrucomicrobiota
GAC
Val
>WENV182135577
OHKJ01000537
187548
Verrucomicrobiota
TCT
Arg
>WENV182135566
OHKJ01000499
406040
Verrucomicrobiota
CGT
Thr
>WENV182135700
OHKJ01001846
57652
Verrucomicrobiota
TGA
Ser
>WENV182135617
OHKJ01000742
406039
Verrucomicrobiota
CAC
Val
>WENV182135511
OHKJ01000294
75458
Verrucomicrobiota
CAG
Leu
>WENV182135579
OHKJ01000542
406368
Verrucomicrobiota
TTG
Gln
>WENV182135474
OHKJ01000181
101461
Verrucomicrobiota
GTA
Tyr
>WENV182135727
OHKJ01002456
293095
Verrucomicrobiota
TTT
Lys
>WENV182135620
OHKJ01000753
187561
Verrucomicrobiota
CGG
Pro
>WENV182135582
OHKJ01000559
406342
Verrucomicrobiota
CAT
Met
>WENV182135544
OHKJ01000409
406351
Verrucomicrobiota
GTT
Asn
>WENV182135679
OHKJ01001527
406346
Verrucomicrobiota
TAC
Val
>WENV182135569
OHKJ01000508
8938
Verrucomicrobiota
GCT
Ser
>WENV182135659
OHKJ01001118
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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