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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182141257
OHKS01015418
99852
Bacillota
GTA
Tyr
>WENV182141146
OHKS01007843
234991
Bacillota
GAT
Ile
>WENV182141347
OHKS01025793
280500
Bacillota
TGC
Ala
>WENV182141117
OHKS01006471
349107
Bacillota
GCC
Gly
>WENV182141118
OHKS01006471
405363
Bacillota
GCA
Cys
>WENV182140888
OHKS01000516
290391
Bacillota
TAC
Val
>WENV182141349
OHKS01026559
280428
Bacillota
GAA
Phe
>WENV182140779
OHKS01000050
179917
Bacillota
CAT
Met
>WENV182140780
OHKS01000050
302145
Bacillota
GAA
Phe
>WENV182140866
OHKS01000378
280492
Bacillota
CTT
Lys
>WENV182141106
OHKS01005844
418726
Bacillota
TGT
Thr
>WENV182141187
OHKS01010324
175842
Bacillota
CAC
Val
>WENV182141325
OHKS01022341
179176
Bacillota
ACG
Arg
>WENV182140903
OHKS01000663
73664
Bacillota
CAG
Leu
>WENV182140990
OHKS01002274
280447
Bacillota
GAC
Val
>WENV182141023
OHKS01002704
5692
Bacillota
GCT
Ser
>WENV182141270
OHKS01016000
186123
Bacillota
GTC
Asp
>WENV182141387
OHKS01033899
175825
Bacillota
GAT
Ile
>WENV182141000
OHKS01002549
73009
Bacillota
CAG
Leu
>WENV182140936
OHKS01001076
73009
Bacillota
CAG
Leu
>WENV182141071
OHKS01004185
189473
Bacillota
GAT
Ile
>WENV182141249
OHKS01014803
291581
Bacillota
CGG
Pro
>WENV182141386
OHKS01033899
280436
Bacillota
TGC
Ala
>WENV182141116
OHKS01006427
175831
Bacillota
ACG
Arg
>WENV182141271
OHKS01016000
291634
Bacillota
GAA
Phe
>WENV182141403
OHKS01038242
346451
Bacillota
TTT
Lys
>WENV182141248
OHKS01014803
480322
Bacillota
CTG
Gln
>WENV182141083
OHKS01004791
175868
Bacillota
GTT
Asn
>WENV182141082
OHKS01004791
398854
Bacillota
CTC
Glu
>WENV182141228
OHKS01013322
291576
Bacillota
CCC
Gly
>WENV182140991
OHKS01002308
480324
Bacillota
TTG
Gln
>WENV182140757
OHKS01000031
497729
Bacillota
CCA
Trp
>WENV182141179
OHKS01009923
303718
Bacillota
TGT
Thr
>WENV182141047
OHKS01003436
303718
Bacillota
TGT
Thr
>WENV182140902
OHKS01000663
56079
Bacillota
AAG
Leu
>WENV182141188
OHKS01010462
323864
Bacillota
TGC
Ala
>WENV182141435
OHKS01050738
398857
Bacillota
TTC
Glu
>WENV182140832
OHKS01000197
117745
Bacillota
GTA
Tyr
>WENV182141186
OHKS01010263
280444
Bacillota
GGT
Thr
>WENV182141275
OHKS01016415
317482
Bacillota
TAC
Val
>WENV182141124
OHKS01006633
483485
Bacillota
CCC
Gly
>WENV182140856
OHKS01000284
46643
Bacillota
TGA
Ser
>WENV182141080
OHKS01004775
179755
Bacillota
CCG
Arg
>WENV182140923
OHKS01000987
179755
Bacillota
CCG
Arg
>WENV182141115
OHKS01006371
398832
Bacillota
TTC
Glu
>WENV182141280
OHKS01016466
280476
Bacillota
TTT
Lys
>WENV182140901
OHKS01000590
398852
Bacillota
CTC
Glu
>WENV182140891
OHKS01000516
285756
Bacillota
GCC
Gly
>WENV182141242
OHKS01014451
398833
Bacillota
TGT
Thr
>WENV182141185
OHKS01010263
175849
Bacillota
GTC
Asp
>WENV182141272
OHKS01016000
405393
Bacillota
GCC
Gly
>WENV182141022
OHKS01002704
56074
Bacillota
TGA
Ser
>WENV182141078
OHKS01004575
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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