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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182142545
OHKU01004161
349107
Bacillota
GCC
Gly
>WENV182142546
OHKU01004161
280466
Bacillota
TAC
Val
>WENV182142501
OHKU01003451
280492
Bacillota
CTT
Lys
>WENV182142601
OHKU01005616
175842
Bacillota
CAC
Val
>WENV182142938
OHKU01035904
291629
Bacillota
CCA
Trp
>WENV182142594
OHKU01005339
348419
Bacillota
GTT
Asn
>WENV182142249
OHKU01000692
348419
Bacillota
GTT
Asn
>WENV182142818
OHKU01018867
179176
Bacillota
ACG
Arg
>WENV182142383
OHKU01001877
190476
Bacillota
CAT
Met
>WENV182142765
OHKU01013082
73664
Bacillota
CAG
Leu
>WENV182142701
OHKU01008936
280447
Bacillota
GAC
Val
>WENV182142564
OHKU01004450
5692
Bacillota
GCT
Ser
>WENV182143013
OHKU01058510
186123
Bacillota
GTC
Asp
>WENV182142659
OHKU01007058
175825
Bacillota
GAT
Ile
>WENV182142626
OHKU01006513
73009
Bacillota
CAG
Leu
>WENV182142957
OHKU01039037
189473
Bacillota
GAT
Ile
>WENV182142651
OHKU01006926
175859
Bacillota
TCT
Arg
>WENV182142658
OHKU01007058
280436
Bacillota
TGC
Ala
>WENV182142278
OHKU01000937
175831
Bacillota
ACG
Arg
>WENV182142909
OHKU01031802
353153
Bacillota
TGC
Ala
>WENV182142776
OHKU01013788
332181
Bacillota
TGT
Thr
>WENV182142967
OHKU01041920
187589
Bacillota
CAT
Met
>WENV182143014
OHKU01058510
291634
Bacillota
GAA
Phe
>WENV182142999
OHKU01052812
176223
Bacillota
CAT
Met
>WENV182142792
OHKU01015893
346451
Bacillota
TTT
Lys
>WENV182142417
OHKU01002270
480322
Bacillota
CTG
Gln
>WENV182142375
OHKU01001803
175868
Bacillota
GTT
Asn
>WENV182142357
OHKU01001604
322848
Bacillota
CTT
Lys
>WENV182142356
OHKU01001604
398854
Bacillota
CTC
Glu
>WENV182142476
OHKU01003226
291576
Bacillota
CCC
Gly
>WENV182142304
OHKU01001170
480324
Bacillota
TTG
Gln
>WENV182142893
OHKU01028777
497729
Bacillota
CCA
Trp
>WENV182142432
OHKU01002557
303718
Bacillota
TGT
Thr
>WENV182142269
OHKU01000864
303718
Bacillota
TGT
Thr
>WENV182142620
OHKU01006272
56079
Bacillota
AAG
Leu
>WENV182142255
OHKU01000745
323864
Bacillota
TGC
Ala
>WENV182142948
OHKU01037670
292374
Bacillota
TGC
Ala
>WENV182142871
OHKU01026214
398857
Bacillota
TTC
Glu
>WENV182142569
OHKU01004639
117745
Bacillota
GTA
Tyr
>WENV182142310
OHKU01001237
280444
Bacillota
GGT
Thr
>WENV182142283
OHKU01000978
317482
Bacillota
TAC
Val
>WENV182142801
OHKU01016790
291597
Bacillota
TGC
Ala
>WENV182142730
OHKU01010595
223045
Bacillota
GAT
Ile
>WENV182142824
OHKU01019933
179755
Bacillota
CCG
Arg
>WENV182142842
OHKU01021661
46835
Bacillota
TAA
Leu
>WENV182142384
OHKU01001877
398832
Bacillota
TTC
Glu
>WENV182142308
OHKU01001235
280462
Bacillota
GAA
Phe
>WENV182142341
OHKU01001515
398852
Bacillota
CTC
Glu
>WENV182142262
OHKU01000817
398852
Bacillota
CTC
Glu
>WENV182142973
OHKU01044980
285601
Bacillota
TTC
Glu
>WENV182142644
OHKU01006802
398833
Bacillota
TGT
Thr
>WENV182142309
OHKU01001235
280463
Bacillota
TTT
Lys
>WENV182142411
OHKU01002191
405393
Bacillota
GCC
Gly
>WENV182142563
OHKU01004450
56074
Bacillota
TGA
Ser
>WENV182142753
OHKU01012237
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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