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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182150989
OHLJ01000093
295385
Bacteroidota
CCA
Trp
>WENV182150962
OHLJ01000051
285360
Bacteroidota
TTT
Lys
>WENV182151095
OHLJ01000446
117741
Bacteroidota
TAG
Leu
>WENV182151082
OHLJ01000364
398829
Bacteroidota
CCT
Arg
>WENV182151005
OHLJ01000120
175838
Bacteroidota
GTT
Asn
>WENV182151006
OHLJ01000120
175838
Bacteroidota
GTT
Asn
>WENV182151088
OHLJ01000388
289031
Bacteroidota
CAT
Met
>WENV182151053
OHLJ01000264
289031
Bacteroidota
CAT
Met
>WENV182151293
OHLJ01002491
280553
Bacteroidota
TTT
Lys
>WENV182151246
OHLJ01001608
280557
Bacteroidota
CAT
Met
>WENV182151083
OHLJ01000371
280557
Bacteroidota
CAT
Met
>WENV182151374
OHLJ01004590
20206
Bacteroidota
GGA
Ser
>WENV182151273
OHLJ01002153
483416
Bacteroidota
CTG
Gln
>WENV182151154
OHLJ01000773
483416
Bacteroidota
CTG
Gln
>WENV182151277
OHLJ01002281
398871
Bacteroidota
TTC
Glu
>WENV182151055
OHLJ01000267
56493
Bacteroidota
TGA
Ser
>WENV182151510
OHLJ01011420
175906
Bacteroidota
GTG
His
>WENV182151201
OHLJ01001079
175903
Bacteroidota
GTG
His
>WENV182151205
OHLJ01001115
118089
Bacteroidota
TAG
Leu
>WENV182151286
OHLJ01002384
398872
Bacteroidota
GGT
Thr
>WENV182151269
OHLJ01002081
175908
Bacteroidota
GTC
Asp
>WENV182151466
OHLJ01008553
178907
Bacteroidota
TCT
Arg
>WENV182151305
OHLJ01002816
405877
Bacteroidota
GGT
Thr
>WENV182151398
OHLJ01005440
20449
Bacteroidota
GGA
Ser
>WENV182151590
OHLJ01021227
178133
Bacteroidota
GAT
Ile
>WENV182151077
OHLJ01000335
21127
Bacteroidota
GGA
Ser
>WENV182151004
OHLJ01000118
56072
Bacteroidota
TAA
Leu
>WENV182150925
OHLJ01000003
57807
Bacteroidota
TGA
Ser
>WENV182150923
OHLJ01000003
57807
Bacteroidota
TGA
Ser
>WENV182151268
OHLJ01002076
175902
Bacteroidota
GGC
Ala
>WENV182151366
OHLJ01004331
480404
Bacteroidota
TTG
Gln
>WENV182150927
OHLJ01000006
480404
Bacteroidota
TTG
Gln
>WENV182151379
OHLJ01004723
280451
Bacteroidota
CGT
Thr
>WENV182151561
OHLJ01016431
418894
Bacteroidota
TTC
Glu
>WENV182151120
OHLJ01000574
99847
Bacteroidota
GTA
Tyr
>WENV182151585
OHLJ01020213
399200
Bacteroidota
CAT
Met
>WENV182150975
OHLJ01000067
186874
Bacteroidota
CAT
Met
>WENV182151576
OHLJ01018904
215303
Bacteroidota
GTC
Asp
>WENV182151030
OHLJ01000202
488746
Bacteroidota
CTG
Gln
>WENV182151687
OHLJ01046185
399026
Bacteroidota
CCT
Arg
>WENV182151528
OHLJ01012875
186108
Bacteroidota
GTT
Asn
>WENV182151642
OHLJ01030749
175844
Bacteroidota
GGC
Ala
>WENV182151078
OHLJ01000340
158068
Bacteroidota
GGG
Pro
>WENV182151010
OHLJ01000138
158068
Bacteroidota
GGG
Pro
>WENV182151075
OHLJ01000322
398828
Bacteroidota
CCG
Arg
>WENV182151252
OHLJ01001692
74084
Bacteroidota
CAG
Leu
>WENV182150958
OHLJ01000045
159415
Bacteroidota
TAC
Val
>WENV182151291
OHLJ01002447
480325
Bacteroidota
CTG
Gln
>WENV182151314
OHLJ01003051
176192
Bacteroidota
TCT
Arg
>WENV182151089
OHLJ01000389
280446
Bacteroidota
TTT
Lys
>WENV182151373
OHLJ01004580
484496
Bacteroidota
TTG
Gln
>WENV182151019
OHLJ01000162
484496
Bacteroidota
TTG
Gln
>WENV182151281
OHLJ01002312
285750
Bacteroidota
CCC
Gly
>WENV182151301
OHLJ01002676
117804
Bacteroidota
TAG
Leu
>WENV182151028
OHLJ01000196
398836
Bacteroidota
GCA
Cys
>WENV182150926
OHLJ01000003
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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