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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182159103
OHMA01000695
172207
Bacteroidota
GGG
Pro
>WENV182159107
OHMA01000747
172207
Bacteroidota
GGG
Pro
>WENV182159008
OHMA01000220
398829
Bacteroidota
CCT
Arg
>WENV182158920
OHMA01000041
400161
Bacteroidota
GGT
Thr
>WENV182158928
OHMA01000047
289031
Bacteroidota
CAT
Met
>WENV182158959
OHMA01000100
280557
Bacteroidota
CAT
Met
>WENV182159031
OHMA01000295
280557
Bacteroidota
CAT
Met
>WENV182159261
OHMA01003812
280557
Bacteroidota
CAT
Met
>WENV182158951
OHMA01000078
20492
Bacteroidota
GGA
Ser
>WENV182159088
OHMA01000521
483416
Bacteroidota
CTG
Gln
>WENV182159529
OHMA01024287
398871
Bacteroidota
TTC
Glu
>WENV182158974
OHMA01000127
118221
Bacteroidota
CAA
Leu
>WENV182158926
OHMA01000044
56493
Bacteroidota
TGA
Ser
>WENV182159119
OHMA01000888
175903
Bacteroidota
GTG
His
>WENV182158973
OHMA01000126
351598
Bacteroidota
CGG
Pro
>WENV182159466
OHMA01017265
156068
Bacteroidota
TAC
Val
>WENV182158889
OHMA01000003
56385
Bacteroidota
TGA
Ser
>WENV182158921
OHMA01000041
312035
Bacteroidota
CCA
Trp
>WENV182159135
OHMA01001089
242241
Bacteroidota
GTC
Asp
>WENV182159134
OHMA01001089
242241
Bacteroidota
GTC
Asp
>WENV182159241
OHMA01003272
175902
Bacteroidota
GGC
Ala
>WENV182159585
OHMA01039641
179697
Bacteroidota
TGT
Thr
>WENV182159256
OHMA01003675
280451
Bacteroidota
CGT
Thr
>WENV182159074
OHMA01000440
280451
Bacteroidota
CGT
Thr
>WENV182159078
OHMA01000455
99847
Bacteroidota
GTA
Tyr
>WENV182158911
OHMA01000024
99847
Bacteroidota
GTA
Tyr
>WENV182159016
OHMA01000235
404109
Bacteroidota
CTC
Glu
>WENV182159015
OHMA01000235
404109
Bacteroidota
CTC
Glu
>WENV182159091
OHMA01000538
186874
Bacteroidota
CAT
Met
>WENV182158905
OHMA01000015
46648
Bacteroidota
TAA
Leu
>WENV182159084
OHMA01000478
488746
Bacteroidota
CTG
Gln
>WENV182158950
OHMA01000078
488746
Bacteroidota
CTG
Gln
>WENV182159019
OHMA01000256
398828
Bacteroidota
CCG
Arg
>WENV182158988
OHMA01000139
398828
Bacteroidota
CCG
Arg
>WENV182158904
OHMA01000015
481328
Bacteroidota
TTG
Gln
>WENV182159111
OHMA01000792
69204
Bacteroidota
TGA
Ser
>WENV182159390
OHMA01009068
280446
Bacteroidota
TTT
Lys
>WENV182159097
OHMA01000594
484496
Bacteroidota
TTG
Gln
>WENV182159104
OHMA01000729
27502
Bacteroidota
GGA
Ser
>WENV182159034
OHMA01000305
27502
Bacteroidota
GGA
Ser
>WENV182159090
OHMA01000535
365112
Bacteroidota
TTT
Lys
>WENV182159071
OHMA01000417
398836
Bacteroidota
GCA
Cys
>WENV182159012
OHMA01000231
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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