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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182167419
OHMS01000127
117741
Bacteroidota
TAG
Leu
>WENV182167310
OHMS01000017
398829
Bacteroidota
CCT
Arg
>WENV182167364
OHMS01000056
175838
Bacteroidota
GTT
Asn
>WENV182167606
OHMS01000708
400161
Bacteroidota
GGT
Thr
>WENV182167358
OHMS01000052
289031
Bacteroidota
CAT
Met
>WENV182167465
OHMS01000223
20206
Bacteroidota
GGA
Ser
>WENV182167760
OHMS01002792
483416
Bacteroidota
CTG
Gln
>WENV182167398
OHMS01000106
201819
Bacteroidota
CAT
Met
>WENV182167905
OHMS01007107
118221
Bacteroidota
CAA
Leu
>WENV182167531
OHMS01000384
56493
Bacteroidota
TGA
Ser
>WENV182167422
OHMS01000130
175903
Bacteroidota
GTG
His
>WENV182167656
OHMS01001163
56385
Bacteroidota
TGA
Ser
>WENV182168138
OHMS01026107
182267
Bacteroidota
GTT
Asn
>WENV182167607
OHMS01000708
312035
Bacteroidota
CCA
Trp
>WENV182167642
OHMS01001034
57807
Bacteroidota
TGA
Ser
>WENV182167949
OHMS01009442
175886
Bacteroidota
GGC
Ala
>WENV182167640
OHMS01001000
175902
Bacteroidota
GGC
Ala
>WENV182168303
OHMS01059865
480404
Bacteroidota
TTG
Gln
>WENV182167669
OHMS01001405
280451
Bacteroidota
CGT
Thr
>WENV182168171
OHMS01030952
418894
Bacteroidota
TTC
Glu
>WENV182167322
OHMS01000029
99847
Bacteroidota
GTA
Tyr
>WENV182168098
OHMS01022920
399200
Bacteroidota
CAT
Met
>WENV182167700
OHMS01001764
404109
Bacteroidota
CTC
Glu
>WENV182167375
OHMS01000070
186874
Bacteroidota
CAT
Met
>WENV182167808
OHMS01003470
46648
Bacteroidota
TAA
Leu
>WENV182167464
OHMS01000223
488746
Bacteroidota
CTG
Gln
>WENV182168020
OHMS01014372
175844
Bacteroidota
GGC
Ala
>WENV182167667
OHMS01001388
187814
Bacteroidota
GTC
Asp
>WENV182167520
OHMS01000352
158068
Bacteroidota
GGG
Pro
>WENV182167458
OHMS01000211
398828
Bacteroidota
CCG
Arg
>WENV182167787
OHMS01003175
481328
Bacteroidota
TTG
Gln
>WENV182167466
OHMS01000229
484496
Bacteroidota
TTG
Gln
>WENV182167945
OHMS01009226
285750
Bacteroidota
CCC
Gly
>WENV182168027
OHMS01014628
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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