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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182185587
OHOE01001021
179231
Actinomycetota
TAC
Val
>WENV182185581
OHOE01000685
176499
Actinomycetota
CAT
Met
>WENV182185586
OHOE01000980
280498
Actinomycetota
GTT
Asn
>WENV182185554
OHOE01000051
140768
Actinomycetota
TAG
Leu
>WENV182185575
OHOE01000600
175837
Actinomycetota
ACG
Arg
>WENV182185564
OHOE01000242
176638
Actinomycetota
GGG
Pro
>WENV182185551
OHOE01000019
280524
Actinomycetota
TGC
Ala
>WENV182185552
OHOE01000019
280523
Actinomycetota
GGC
Ala
>WENV182185553
OHOE01000025
175841
Actinomycetota
TAT
Ile
>WENV182185555
OHOE01000070
175872
Actinomycetota
GTC
Asp
>WENV182185576
OHOE01000627
20205
Actinomycetota
GCT
Ser
>WENV182185584
OHOE01000741
280450
Actinomycetota
TTT
Lys
>WENV182185590
OHOE01001196
480329
Actinomycetota
CCC
Gly
>WENV182185589
OHOE01001069
175882
Actinomycetota
TGG
Pro
>WENV182185556
OHOE01000090
99865
Actinomycetota
CAG
Leu
>WENV182185547
OHOE01000011
280489
Actinomycetota
CTC
Glu
>WENV182185577
OHOE01000636
280499
Actinomycetota
CCT
Arg
>WENV182185548
OHOE01000011
398853
Actinomycetota
CTG
Gln
>WENV182185579
OHOE01000649
175843
Actinomycetota
CAA
Leu
>WENV182185567
OHOE01000304
46642
Actinomycetota
CGA
Ser
>WENV182185580
OHOE01000685
117903
Actinomycetota
GTA
Tyr
>WENV182185557
OHOE01000099
56071
Actinomycetota
TGA
Ser
>WENV182185578
OHOE01000647
147796
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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