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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182187167
OHOK01000040
117741
Bacteroidota
TAG
Leu
>WENV182187147
OHOK01000007
398829
Bacteroidota
CCT
Arg
>WENV182187171
OHOK01000042
400161
Bacteroidota
GGT
Thr
>WENV182187364
OHOK01000888
289031
Bacteroidota
CAT
Met
>WENV182187194
OHOK01000082
280557
Bacteroidota
CAT
Met
>WENV182187733
OHOK01022923
20492
Bacteroidota
GGA
Ser
>WENV182187266
OHOK01000260
20206
Bacteroidota
GGA
Ser
>WENV182187372
OHOK01000992
483416
Bacteroidota
CTG
Gln
>WENV182187251
OHOK01000212
175903
Bacteroidota
GTG
His
>WENV182187609
OHOK01008358
398872
Bacteroidota
GGT
Thr
>WENV182187151
OHOK01000012
178571
Bacteroidota
GTT
Asn
>WENV182187862
OHOK01053355
178907
Bacteroidota
TCT
Arg
>WENV182187162
OHOK01000027
56385
Bacteroidota
TGA
Ser
>WENV182187638
OHOK01010648
29791
Bacteroidota
GCT
Ser
>WENV182187332
OHOK01000554
56072
Bacteroidota
TAA
Leu
>WENV182187261
OHOK01000239
57807
Bacteroidota
TGA
Ser
>WENV182187802
OHOK01035486
175886
Bacteroidota
GGC
Ala
>WENV182187208
OHOK01000112
175902
Bacteroidota
GGC
Ala
>WENV182187165
OHOK01000038
283315
Bacteroidota
CGT
Thr
>WENV182187639
OHOK01010648
398860
Bacteroidota
CTC
Glu
>WENV182187488
OHOK01002902
480404
Bacteroidota
TTG
Gln
>WENV182187195
OHOK01000083
156128
Bacteroidota
GGG
Pro
>WENV182187400
OHOK01001264
280451
Bacteroidota
CGT
Thr
>WENV182187213
OHOK01000121
99847
Bacteroidota
GTA
Tyr
>WENV182187850
OHOK01047665
399200
Bacteroidota
CAT
Met
>WENV182187156
OHOK01000019
404109
Bacteroidota
CTC
Glu
>WENV182187474
OHOK01002432
186874
Bacteroidota
CAT
Met
>WENV182187267
OHOK01000261
488746
Bacteroidota
CTG
Gln
>WENV182187635
OHOK01010066
175844
Bacteroidota
GGC
Ala
>WENV182187519
OHOK01003560
175844
Bacteroidota
GGC
Ala
>WENV182187839
OHOK01044567
280515
Bacteroidota
CCA
Trp
>WENV182187154
OHOK01000019
187814
Bacteroidota
GTC
Asp
>WENV182187680
OHOK01015886
183889
Bacteroidota
GGC
Ala
>WENV182187287
OHOK01000341
178134
Bacteroidota
TGG
Pro
>WENV182187174
OHOK01000048
158068
Bacteroidota
GGG
Pro
>WENV182187170
OHOK01000042
118220
Bacteroidota
GTA
Tyr
>WENV182187148
OHOK01000008
398828
Bacteroidota
CCG
Arg
>WENV182187370
OHOK01000960
481044
Bacteroidota
>WENV182187529
OHOK01004396
159415
Bacteroidota
TAC
Val
>WENV182187870
OHOK01056671
176192
Bacteroidota
TCT
Arg
>WENV182187852
OHOK01048061
400088
Bacteroidota
GGT
Thr
>WENV182187260
OHOK01000234
484496
Bacteroidota
TTG
Gln
>WENV182187363
OHOK01000875
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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