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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182188187
OHOM01000159
117741
Bacteroidota
TAG
Leu
>WENV182188149
OHOM01000054
398829
Bacteroidota
CCT
Arg
>WENV182188327
OHOM01002342
404226
Bacteroidota
CCT
Arg
>WENV182188376
OHOM01005302
175904
Bacteroidota
CGG
Pro
>WENV182188292
OHOM01001211
280553
Bacteroidota
TTT
Lys
>WENV182188194
OHOM01000253
280557
Bacteroidota
CAT
Met
>WENV182188154
OHOM01000064
280557
Bacteroidota
CAT
Met
>WENV182188130
OHOM01000017
20206
Bacteroidota
GGA
Ser
>WENV182188326
OHOM01002342
398871
Bacteroidota
TTC
Glu
>WENV182188176
OHOM01000117
56493
Bacteroidota
TGA
Ser
>WENV182188297
OHOM01001440
175906
Bacteroidota
GTG
His
>WENV182188177
OHOM01000117
175903
Bacteroidota
GTG
His
>WENV182188272
OHOM01000782
351598
Bacteroidota
CGG
Pro
>WENV182188212
OHOM01000352
351598
Bacteroidota
CGG
Pro
>WENV182188315
OHOM01001869
156068
Bacteroidota
TAC
Val
>WENV182188294
OHOM01001272
118089
Bacteroidota
TAG
Leu
>WENV182188245
OHOM01000570
280530
Bacteroidota
CCA
Trp
>WENV182188282
OHOM01000927
178907
Bacteroidota
TCT
Arg
>WENV182188137
OHOM01000026
29791
Bacteroidota
GCT
Ser
>WENV182188279
OHOM01000830
20449
Bacteroidota
GGA
Ser
>WENV182188350
OHOM01003091
178133
Bacteroidota
GAT
Ile
>WENV182188171
OHOM01000115
175902
Bacteroidota
GGC
Ala
>WENV182188138
OHOM01000026
398860
Bacteroidota
CTC
Glu
>WENV182188281
OHOM01000925
280451
Bacteroidota
CGT
Thr
>WENV182188151
OHOM01000060
99847
Bacteroidota
GTA
Tyr
>WENV182188122
OHOM01000007
99847
Bacteroidota
GTA
Tyr
>WENV182188280
OHOM01000850
399200
Bacteroidota
CAT
Met
>WENV182188129
OHOM01000017
488746
Bacteroidota
CTG
Gln
>WENV182188354
OHOM01003221
280478
Bacteroidota
GCC
Gly
>WENV182188116
OHOM01000002
175844
Bacteroidota
GGC
Ala
>WENV182188295
OHOM01001287
73011
Bacteroidota
CAA
Leu
>WENV182188186
OHOM01000155
398828
Bacteroidota
CCG
Arg
>WENV182188160
OHOM01000082
398828
Bacteroidota
CCG
Arg
>WENV182188355
OHOM01003221
74084
Bacteroidota
CAG
Leu
>WENV182188284
OHOM01001030
480325
Bacteroidota
CTG
Gln
>WENV182188144
OHOM01000040
176192
Bacteroidota
TCT
Arg
>WENV182188425
OHOM01011936
400088
Bacteroidota
GGT
Thr
>WENV182188159
OHOM01000079
69204
Bacteroidota
TGA
Ser
>WENV182188156
OHOM01000074
69204
Bacteroidota
TGA
Ser
>WENV182188119
OHOM01000004
69204
Bacteroidota
TGA
Ser
>WENV182188268
OHOM01000731
280446
Bacteroidota
TTT
Lys
>WENV182188211
OHOM01000321
280446
Bacteroidota
TTT
Lys
>WENV182188124
OHOM01000011
280446
Bacteroidota
TTT
Lys
>WENV182188123
OHOM01000010
484496
Bacteroidota
TTG
Gln
>WENV182188169
OHOM01000104
484496
Bacteroidota
TTG
Gln
>WENV182188140
OHOM01000035
484496
Bacteroidota
TTG
Gln
>WENV182188261
OHOM01000668
365112
Bacteroidota
TTT
Lys
>WENV182188162
OHOM01000085
365112
Bacteroidota
TTT
Lys
>WENV182188135
OHOM01000023
365112
Bacteroidota
TTT
Lys
>WENV182188117
OHOM01000003
365112
Bacteroidota
TTT
Lys
>WENV182188287
OHOM01001094
398836
Bacteroidota
GCA
Cys
>WENV182188253
OHOM01000610
398836
Bacteroidota
GCA
Cys
>WENV182188249
OHOM01000589
398836
Bacteroidota
GCA
Cys
>WENV182188236
OHOM01000520
398836
Bacteroidota
GCA
Cys
>WENV182188113
OHOM01000002
398836
Bacteroidota
GCA
Cys
>WENV182188198
OHOM01000259
170323
Bacteroidota
GGG
Pro
>WENV182188146
OHOM01000043
170323
Bacteroidota
GGG
Pro
>WENV182188128
OHOM01000017
170323
Bacteroidota
GGG
Pro
>WENV182188120
OHOM01000005
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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