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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182201223
OHPM01000045
285360
Bacteroidota
TTT
Lys
>WENV182201470
OHPM01002801
398829
Bacteroidota
CCT
Arg
>WENV182201429
OHPM01001843
175904
Bacteroidota
CGG
Pro
>WENV182201269
OHPM01000128
280557
Bacteroidota
CAT
Met
>WENV182201368
OHPM01000576
20492
Bacteroidota
GGA
Ser
>WENV182201752
OHPM01037809
483416
Bacteroidota
CTG
Gln
>WENV182201228
OHPM01000051
56493
Bacteroidota
TGA
Ser
>WENV182201186
OHPM01000001
56493
Bacteroidota
TGA
Ser
>WENV182201696
OHPM01022351
175903
Bacteroidota
GTG
His
>WENV182201372
OHPM01000608
351598
Bacteroidota
CGG
Pro
>WENV182201227
OHPM01000049
351598
Bacteroidota
CGG
Pro
>WENV182201405
OHPM01001180
118089
Bacteroidota
TAG
Leu
>WENV182201513
OHPM01004231
398872
Bacteroidota
GGT
Thr
>WENV182201394
OHPM01000998
203954
Bacteroidota
GTC
Asp
>WENV182201190
OHPM01000001
29791
Bacteroidota
GCT
Ser
>WENV182201505
OHPM01004111
57645
Bacteroidota
TGA
Ser
>WENV182201387
OHPM01000841
20449
Bacteroidota
GGA
Ser
>WENV182201497
OHPM01003869
178133
Bacteroidota
GAT
Ile
>WENV182201318
OHPM01000232
56072
Bacteroidota
TAA
Leu
>WENV182201288
OHPM01000140
57807
Bacteroidota
TGA
Ser
>WENV182201290
OHPM01000148
175902
Bacteroidota
GGC
Ala
>WENV182201191
OHPM01000001
398860
Bacteroidota
CTC
Glu
>WENV182201260
OHPM01000100
480404
Bacteroidota
TTG
Gln
>WENV182201232
OHPM01000072
280451
Bacteroidota
CGT
Thr
>WENV182201305
OHPM01000183
99847
Bacteroidota
GTA
Tyr
>WENV182201212
OHPM01000023
99847
Bacteroidota
GTA
Tyr
>WENV182201193
OHPM01000002
99847
Bacteroidota
GTA
Tyr
>WENV182201676
OHPM01018418
399200
Bacteroidota
CAT
Met
>WENV182201697
OHPM01022614
186874
Bacteroidota
CAT
Met
>WENV182201189
OHPM01000001
332896
Bacteroidota
TTT
Lys
>WENV182201255
OHPM01000090
488746
Bacteroidota
CTG
Gln
>WENV182201602
OHPM01009621
280478
Bacteroidota
GCC
Gly
>WENV182201251
OHPM01000084
175844
Bacteroidota
GGC
Ala
>WENV182201741
OHPM01034056
280515
Bacteroidota
CCA
Trp
>WENV182201638
OHPM01012679
183889
Bacteroidota
GGC
Ala
>WENV182201364
OHPM01000505
398828
Bacteroidota
CCG
Arg
>WENV182201249
OHPM01000080
159415
Bacteroidota
TAC
Val
>WENV182201391
OHPM01000925
176192
Bacteroidota
TCT
Arg
>WENV182201209
OHPM01000021
176192
Bacteroidota
TCT
Arg
>WENV182201220
OHPM01000034
280446
Bacteroidota
TTT
Lys
>WENV182201254
OHPM01000088
484496
Bacteroidota
TTG
Gln
>WENV182201389
OHPM01000912
285750
Bacteroidota
CCC
Gly
>WENV182201261
OHPM01000102
398836
Bacteroidota
GCA
Cys
>WENV182201224
OHPM01000048
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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