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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182206081
OHPT01030990
280500
Bacillota
TGC
Ala
>WENV182205832
OHPT01002270
405363
Bacillota
GCA
Cys
>WENV182205793
OHPT01001239
280428
Bacillota
GAA
Phe
>WENV182205788
OHPT01001172
179917
Bacillota
CAT
Met
>WENV182205956
OHPT01009044
175842
Bacillota
CAC
Val
>WENV182205959
OHPT01009094
179563
Bacillota
GAT
Ile
>WENV182206045
OHPT01022768
190476
Bacillota
CAT
Met
>WENV182205741
OHPT01000611
280447
Bacillota
GAC
Val
>WENV182205852
OHPT01003035
5692
Bacillota
GCT
Ser
>WENV182205930
OHPT01006923
312274
Bacillota
GGC
Ala
>WENV182205897
OHPT01004833
186123
Bacillota
GTC
Asp
>WENV182206098
OHPT01033950
280427
Bacillota
TAC
Val
>WENV182205822
OHPT01001808
284723
Bacillota
TAC
Val
>WENV182205949
OHPT01008765
73009
Bacillota
CAG
Leu
>WENV182205895
OHPT01004765
291581
Bacillota
CGG
Pro
>WENV182205841
OHPT01002659
175859
Bacillota
TCT
Arg
>WENV182205626
OHPT01000011
290325
Bacillota
GCC
Gly
>WENV182205831
OHPT01002140
175831
Bacillota
ACG
Arg
>WENV182206022
OHPT01017929
332181
Bacillota
TGT
Thr
>WENV182205898
OHPT01004833
291634
Bacillota
GAA
Phe
>WENV182205894
OHPT01004765
480322
Bacillota
CTG
Gln
>WENV182206101
OHPT01034152
314834
Bacillota
TGC
Ala
>WENV182205902
OHPT01005276
291576
Bacillota
CCC
Gly
>WENV182205856
OHPT01003091
480324
Bacillota
TTG
Gln
>WENV182205871
OHPT01003735
56079
Bacillota
AAG
Leu
>WENV182205968
OHPT01009547
323864
Bacillota
TGC
Ala
>WENV182205953
OHPT01008882
117745
Bacillota
GTA
Tyr
>WENV182205859
OHPT01003205
280444
Bacillota
GGT
Thr
>WENV182206026
OHPT01018882
483485
Bacillota
CCC
Gly
>WENV182205855
OHPT01003082
46835
Bacillota
TAA
Leu
>WENV182206046
OHPT01022768
398832
Bacillota
TTC
Glu
>WENV182205854
OHPT01003082
175915
Bacillota
GTC
Asp
>WENV182206001
OHPT01014804
283367
Bacillota
GCC
Gly
>WENV182206090
OHPT01032165
280476
Bacillota
TTT
Lys
>WENV182205920
OHPT01006178
398852
Bacillota
CTC
Glu
>WENV182205961
OHPT01009355
280483
Bacillota
GAA
Phe
>WENV182205747
OHPT01000699
175857
Bacillota
GTG
His
>WENV182205962
OHPT01009355
285756
Bacillota
GCC
Gly
>WENV182205935
OHPT01007654
398833
Bacillota
TGT
Thr
>WENV182205845
OHPT01002702
405393
Bacillota
GCC
Gly
>WENV182205851
OHPT01003035
56074
Bacillota
TGA
Ser
>WENV182205939
OHPT01008114
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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