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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182215822
OHQM01003505
406043
Verrucomicrobiota
GCA
Cys
>WENV182215486
OHQM01000190
406350
Verrucomicrobiota
TGT
Thr
>WENV182215558
OHQM01000418
148006
Verrucomicrobiota
CAA
Leu
>WENV182215745
OHQM01001868
101600
Verrucomicrobiota
AAG
Leu
>WENV182215688
OHQM01001273
293105
Verrucomicrobiota
CAT
Met
>WENV182215509
OHQM01000235
405901
Verrucomicrobiota
GCC
Gly
>WENV182215582
OHQM01000499
483642
Verrucomicrobiota
CCC
Gly
>WENV182215510
OHQM01000236
229220
Verrucomicrobiota
CAT
Met
>WENV182215489
OHQM01000190
8960
Verrucomicrobiota
CGA
Ser
>WENV182215685
OHQM01001232
101463
Verrucomicrobiota
TAA
Leu
>WENV182215661
OHQM01001030
157427
Verrucomicrobiota
GTC
Asp
>WENV182215612
OHQM01000629
157427
Verrucomicrobiota
GTC
Asp
>WENV182216048
OHQM01014733
293079
Verrucomicrobiota
CGC
Ala
>WENV182215816
OHQM01003246
120352
Verrucomicrobiota
TAG
Leu
>WENV182216109
OHQM01019993
292636
Verrucomicrobiota
>WENV182215823
OHQM01003505
298263
Verrucomicrobiota
TTC
Glu
>WENV182215628
OHQM01000716
293069
Verrucomicrobiota
CTT
Lys
>WENV182215629
OHQM01000727
406336
Verrucomicrobiota
CCT
Arg
>WENV182215859
OHQM01004690
406369
Verrucomicrobiota
CCG
Arg
>WENV182215453
OHQM01000103
405940
Verrucomicrobiota
GGT
Thr
>WENV182215789
OHQM01002493
406044
Verrucomicrobiota
CTG
Gln
>WENV182215705
OHQM01001440
187556
Verrucomicrobiota
GGG
Pro
>WENV182215687
OHQM01001273
406037
Verrucomicrobiota
GTG
His
>WENV182215709
OHQM01001500
406360
Verrucomicrobiota
GAC
Val
>WENV182215570
OHQM01000468
187548
Verrucomicrobiota
TCT
Arg
>WENV182215627
OHQM01000716
406040
Verrucomicrobiota
CGT
Thr
>WENV182215738
OHQM01001767
57652
Verrucomicrobiota
TGA
Ser
>WENV182215707
OHQM01001474
406039
Verrucomicrobiota
CAC
Val
>WENV182215548
OHQM01000383
75458
Verrucomicrobiota
CAG
Leu
>WENV182215967
OHQM01008366
406368
Verrucomicrobiota
TTG
Gln
>WENV182215596
OHQM01000564
21159
Verrucomicrobiota
GGA
Ser
>WENV182215536
OHQM01000320
101461
Verrucomicrobiota
GTA
Tyr
>WENV182215609
OHQM01000590
293095
Verrucomicrobiota
TTT
Lys
>WENV182215659
OHQM01001019
187561
Verrucomicrobiota
CGG
Pro
>WENV182215662
OHQM01001040
406342
Verrucomicrobiota
CAT
Met
>WENV182216275
OHQM01051813
406351
Verrucomicrobiota
GTT
Asn
>WENV182215700
OHQM01001427
303305
Verrucomicrobiota
GGC
Ala
>WENV182215581
OHQM01000499
507474
Verrucomicrobiota
TCC
Gly
>WENV182216157
OHQM01025454
406346
Verrucomicrobiota
TAC
Val
>WENV182215787
OHQM01002468
8938
Verrucomicrobiota
GCT
Ser
>WENV182215647
OHQM01000921
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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