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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182218970
OHQQ01042812
179231
Actinomycetota
TAC
Val
>WENV182218898
OHQQ01024920
459899
Actinomycetota
TTC
Glu
>WENV182218799
OHQQ01007964
280524
Actinomycetota
TGC
Ala
>WENV182218800
OHQQ01007964
280523
Actinomycetota
GGC
Ala
>WENV182218969
OHQQ01042779
175841
Actinomycetota
TAT
Ile
>WENV182218901
OHQQ01025519
175872
Actinomycetota
GTC
Asp
>WENV182218825
OHQQ01010148
175926
Actinomycetota
CAT
Met
>WENV182218874
OHQQ01017936
280450
Actinomycetota
TTT
Lys
>WENV182218871
OHQQ01016481
20209
Actinomycetota
GAG
Leu
>WENV182218861
OHQQ01014310
280489
Actinomycetota
CTC
Glu
>WENV182218862
OHQQ01014310
398853
Actinomycetota
CTG
Gln
>WENV182218899
OHQQ01025212
175843
Actinomycetota
CAA
Leu
>WENV182218796
OHQQ01007806
46642
Actinomycetota
CGA
Ser
>WENV182218940
OHQQ01035023
147796
Actinomycetota
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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