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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182223823
OHRA01015546
398829
Bacteroidota
CCT
Arg
>WENV182223357
OHRA01000012
400161
Bacteroidota
GGT
Thr
>WENV182223434
OHRA01000199
156422
Bacteroidota
TAC
Val
>WENV182223917
OHRA01031155
280557
Bacteroidota
CAT
Met
>WENV182223338
OHRA01000001
118221
Bacteroidota
CAA
Leu
>WENV182223807
OHRA01013191
56493
Bacteroidota
TGA
Ser
>WENV182223358
OHRA01000012
283316
Bacteroidota
CCA
Trp
>WENV182223361
OHRA01000020
56385
Bacteroidota
TGA
Ser
>WENV182223739
OHRA01006477
20449
Bacteroidota
GGA
Ser
>WENV182223716
OHRA01004682
56072
Bacteroidota
TAA
Leu
>WENV182223422
OHRA01000146
404109
Bacteroidota
CTC
Glu
>WENV182223421
OHRA01000146
404109
Bacteroidota
CTC
Glu
>WENV182223351
OHRA01000008
46648
Bacteroidota
TAA
Leu
>WENV182223810
OHRA01013427
488746
Bacteroidota
CTG
Gln
>WENV182223918
OHRA01031321
175844
Bacteroidota
GGC
Ala
>WENV182223533
OHRA01000702
187814
Bacteroidota
GTC
Asp
>WENV182223532
OHRA01000702
187814
Bacteroidota
GTC
Asp
>WENV182223534
OHRA01000710
158068
Bacteroidota
GGG
Pro
>WENV182223847
OHRA01018277
398828
Bacteroidota
CCG
Arg
>WENV182223353
OHRA01000008
481328
Bacteroidota
TTG
Gln
>WENV182223707
OHRA01004315
484496
Bacteroidota
TTG
Gln
>WENV182223699
OHRA01003857
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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