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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182231062
OHRM01000071
172207
Bacteroidota
GGG
Pro
>WENV182231145
OHRM01000239
117741
Bacteroidota
TAG
Leu
>WENV182231189
OHRM01000410
398829
Bacteroidota
CCT
Arg
>WENV182231333
OHRM01001952
404226
Bacteroidota
CCT
Arg
>WENV182231509
OHRM01007152
175904
Bacteroidota
CGG
Pro
>WENV182231141
OHRM01000218
289031
Bacteroidota
CAT
Met
>WENV182231094
OHRM01000117
280557
Bacteroidota
CAT
Met
>WENV182231109
OHRM01000152
20206
Bacteroidota
GGA
Ser
>WENV182231077
OHRM01000088
483416
Bacteroidota
CTG
Gln
>WENV182231346
OHRM01002235
398871
Bacteroidota
TTC
Glu
>WENV182231886
OHRM01057830
175906
Bacteroidota
GTG
His
>WENV182231184
OHRM01000393
175903
Bacteroidota
GTG
His
>WENV182231164
OHRM01000345
351598
Bacteroidota
CGG
Pro
>WENV182231902
OHRM01064022
291612
Bacteroidota
>WENV182231464
OHRM01005167
178907
Bacteroidota
TCT
Arg
>WENV182231744
OHRM01028182
29791
Bacteroidota
GCT
Ser
>WENV182231321
OHRM01001602
20449
Bacteroidota
GGA
Ser
>WENV182231514
OHRM01007269
175886
Bacteroidota
GGC
Ala
>WENV182231043
OHRM01000035
175902
Bacteroidota
GGC
Ala
>WENV182231567
OHRM01009622
480404
Bacteroidota
TTG
Gln
>WENV182231017
OHRM01000018
418894
Bacteroidota
TTC
Glu
>WENV182231016
OHRM01000018
418894
Bacteroidota
TTC
Glu
>WENV182231103
OHRM01000138
99847
Bacteroidota
GTA
Tyr
>WENV182231059
OHRM01000060
99847
Bacteroidota
GTA
Tyr
>WENV182231456
OHRM01005057
399200
Bacteroidota
CAT
Met
>WENV182231102
OHRM01000136
186874
Bacteroidota
CAT
Met
>WENV182231105
OHRM01000147
178179
Bacteroidota
GGC
Ala
>WENV182231063
OHRM01000071
488746
Bacteroidota
CTG
Gln
>WENV182231541
OHRM01008473
280478
Bacteroidota
GCC
Gly
>WENV182231192
OHRM01000435
27524
Bacteroidota
GGA
Ser
>WENV182231037
OHRM01000031
187400
Bacteroidota
GTT
Asn
>WENV182231470
OHRM01005451
73011
Bacteroidota
CAA
Leu
>WENV182231559
OHRM01009534
183889
Bacteroidota
GGC
Ala
>WENV182231216
OHRM01000585
372845
Bacteroidota
CCA
Trp
>WENV182231503
OHRM01007044
186142
Bacteroidota
GAT
Ile
>WENV182231036
OHRM01000030
398828
Bacteroidota
CCG
Arg
>WENV182231033
OHRM01000025
398828
Bacteroidota
CCG
Arg
>WENV182231483
OHRM01006064
74084
Bacteroidota
CAG
Leu
>WENV182231709
OHRM01023215
480325
Bacteroidota
CTG
Gln
>WENV182231107
OHRM01000148
176192
Bacteroidota
TCT
Arg
>WENV182231353
OHRM01002333
69204
Bacteroidota
TGA
Ser
>WENV182231130
OHRM01000193
280446
Bacteroidota
TTT
Lys
>WENV182231114
OHRM01000169
484496
Bacteroidota
TTG
Gln
>WENV182231113
OHRM01000157
27502
Bacteroidota
GGA
Ser
>WENV182231044
OHRM01000038
27502
Bacteroidota
GGA
Ser
>WENV182231616
OHRM01014163
188555
Bacteroidota
CAT
Met
>WENV182231504
OHRM01007044
186143
Bacteroidota
TGC
Ala
>WENV182231131
OHRM01000194
365112
Bacteroidota
TTT
Lys
>WENV182231122
OHRM01000182
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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