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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182233085
OHRP01008070
99852
Bacillota
GTA
Tyr
>WENV182233082
OHRP01007556
280500
Bacillota
TGC
Ala
>WENV182232765
OHRP01000063
405363
Bacillota
GCA
Cys
>WENV182232761
OHRP01000063
280428
Bacillota
GAA
Phe
>WENV182232800
OHRP01000162
280428
Bacillota
GAA
Phe
>WENV182232976
OHRP01002074
291579
Bacillota
GAA
Phe
>WENV182232975
OHRP01002074
179917
Bacillota
CAT
Met
>WENV182233079
OHRP01007296
280492
Bacillota
CTT
Lys
>WENV182232955
OHRP01001734
175842
Bacillota
CAC
Val
>WENV182232889
OHRP01000573
73664
Bacillota
CAG
Leu
>WENV182232940
OHRP01001277
280447
Bacillota
GAC
Val
>WENV182232881
OHRP01000491
5692
Bacillota
GCT
Ser
>WENV182233115
OHRP01010319
175825
Bacillota
GAT
Ile
>WENV182233078
OHRP01007030
284723
Bacillota
TAC
Val
>WENV182233037
OHRP01004128
73009
Bacillota
CAG
Leu
>WENV182232793
OHRP01000152
291581
Bacillota
CGG
Pro
>WENV182232852
OHRP01000320
175859
Bacillota
TCT
Arg
>WENV182233114
OHRP01010319
280436
Bacillota
TGC
Ala
>WENV182233196
OHRP01027502
175847
Bacillota
GTC
Asp
>WENV182232914
OHRP01000966
175831
Bacillota
ACG
Arg
>WENV182233089
OHRP01008396
480322
Bacillota
CTG
Gln
>WENV182232792
OHRP01000152
480322
Bacillota
CTG
Gln
>WENV182232804
OHRP01000169
175868
Bacillota
GTT
Asn
>WENV182232893
OHRP01000686
291576
Bacillota
CCC
Gly
>WENV182232753
OHRP01000050
291576
Bacillota
CCC
Gly
>WENV182232834
OHRP01000253
480324
Bacillota
TTG
Gln
>WENV182233086
OHRP01008241
56079
Bacillota
AAG
Leu
>WENV182233008
OHRP01002758
323864
Bacillota
TGC
Ala
>WENV182233145
OHRP01016168
117745
Bacillota
GTA
Tyr
>WENV182232866
OHRP01000385
280444
Bacillota
GGT
Thr
>WENV182232787
OHRP01000117
280444
Bacillota
GGT
Thr
>WENV182233140
OHRP01015930
46643
Bacillota
TGA
Ser
>WENV182232968
OHRP01001964
179755
Bacillota
CCG
Arg
>WENV182232873
OHRP01000426
179755
Bacillota
CCG
Arg
>WENV182233214
OHRP01031441
398852
Bacillota
CTC
Glu
>WENV182233244
OHRP01039823
298260
Bacillota
GTT
Asn
>WENV182232980
OHRP01002111
175857
Bacillota
GTG
His
>WENV182233006
OHRP01002592
398833
Bacillota
TGT
Thr
>WENV182232865
OHRP01000385
175849
Bacillota
GTC
Asp
>WENV182232763
OHRP01000063
175849
Bacillota
GTC
Asp
>WENV182232880
OHRP01000491
56074
Bacillota
TGA
Ser
>WENV182232786
OHRP01000116
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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