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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182233371
OHRQ01000177
349107
Bacillota
GCC
Gly
>WENV182233370
OHRQ01000177
280428
Bacillota
GAA
Phe
>WENV182233409
OHRQ01000294
175842
Bacillota
CAC
Val
>WENV182233706
OHRQ01005778
348419
Bacillota
GTT
Asn
>WENV182233798
OHRQ01013357
184497
Bacillota
GGG
Pro
>WENV182233753
OHRQ01009004
404079
Bacillota
CAT
Met
>WENV182233545
OHRQ01001127
190476
Bacillota
CAT
Met
>WENV182233518
OHRQ01000815
280447
Bacillota
GAC
Val
>WENV182233406
OHRQ01000271
280447
Bacillota
GAC
Val
>WENV182233768
OHRQ01010097
312274
Bacillota
GGC
Ala
>WENV182233591
OHRQ01001790
73009
Bacillota
CAG
Leu
>WENV182233386
OHRQ01000221
291581
Bacillota
CGG
Pro
>WENV182233374
OHRQ01000194
175859
Bacillota
TCT
Arg
>WENV182233877
OHRQ01030226
175831
Bacillota
ACG
Arg
>WENV182233577
OHRQ01001621
294020
Bacillota
TAC
Val
>WENV182233618
OHRQ01002495
183957
Bacillota
CCT
Arg
>WENV182233804
OHRQ01014055
346451
Bacillota
TTT
Lys
>WENV182233408
OHRQ01000283
480322
Bacillota
CTG
Gln
>WENV182233385
OHRQ01000221
480322
Bacillota
CTG
Gln
>WENV182233594
OHRQ01001839
401685
Bacillota
TTG
Gln
>WENV182233818
OHRQ01016568
175868
Bacillota
GTT
Asn
>WENV182233491
OHRQ01000601
322848
Bacillota
CTT
Lys
>WENV182233490
OHRQ01000601
398854
Bacillota
CTC
Glu
>WENV182233387
OHRQ01000221
480324
Bacillota
TTG
Gln
>WENV182233883
OHRQ01034879
497729
Bacillota
CCA
Trp
>WENV182233520
OHRQ01000819
303718
Bacillota
TGT
Thr
>WENV182233647
OHRQ01003467
323864
Bacillota
TGC
Ala
>WENV182233707
OHRQ01005778
398857
Bacillota
TTC
Glu
>WENV182233639
OHRQ01003295
280444
Bacillota
GGT
Thr
>WENV182233600
OHRQ01001941
179755
Bacillota
CCG
Arg
>WENV182233546
OHRQ01001127
398832
Bacillota
TTC
Glu
>WENV182233573
OHRQ01001567
118669
Bacillota
GTA
Tyr
>WENV182233680
OHRQ01004797
52748
Bacillota
TGA
Ser
>WENV182233756
OHRQ01009183
398852
Bacillota
CTC
Glu
>WENV182233775
OHRQ01011033
280483
Bacillota
GAA
Phe
>WENV182233776
OHRQ01011033
285756
Bacillota
GCC
Gly
>WENV182233672
OHRQ01004286
398833
Bacillota
TGT
Thr
>WENV182233640
OHRQ01003295
175849
Bacillota
GTC
Asp
>WENV182233703
OHRQ01005639
405393
Bacillota
GCC
Gly
>WENV182233663
OHRQ01004018
56074
Bacillota
TGA
Ser
>WENV182233601
OHRQ01001959
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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