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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182237265
OHRW01002411
285360
Bacteroidota
TTT
Lys
>WENV182237024
OHRW01000058
117741
Bacteroidota
TAG
Leu
>WENV182237141
OHRW01000614
175904
Bacteroidota
CGG
Pro
>WENV182237365
OHRW01012146
289031
Bacteroidota
CAT
Met
>WENV182237099
OHRW01000344
280553
Bacteroidota
TTT
Lys
>WENV182237026
OHRW01000061
280557
Bacteroidota
CAT
Met
>WENV182237068
OHRW01000237
20492
Bacteroidota
GGA
Ser
>WENV182236984
OHRW01000009
20206
Bacteroidota
GGA
Ser
>WENV182237328
OHRW01005404
483416
Bacteroidota
CTG
Gln
>WENV182237063
OHRW01000200
398871
Bacteroidota
TTC
Glu
>WENV182237153
OHRW01000888
56493
Bacteroidota
TGA
Ser
>WENV182236997
OHRW01000020
56493
Bacteroidota
TGA
Ser
>WENV182236978
OHRW01000008
56493
Bacteroidota
TGA
Ser
>WENV182237171
OHRW01001114
175906
Bacteroidota
GTG
His
>WENV182237170
OHRW01001114
175906
Bacteroidota
GTG
His
>WENV182236979
OHRW01000008
175903
Bacteroidota
GTG
His
>WENV182237142
OHRW01000614
280530
Bacteroidota
CCA
Trp
>WENV182237275
OHRW01002772
175936
Bacteroidota
CAT
Met
>WENV182237150
OHRW01000831
178907
Bacteroidota
TCT
Arg
>WENV182237071
OHRW01000242
20449
Bacteroidota
GGA
Ser
>WENV182236993
OHRW01000016
175902
Bacteroidota
GGC
Ala
>WENV182237057
OHRW01000182
398860
Bacteroidota
CTC
Glu
>WENV182237295
OHRW01004159
480404
Bacteroidota
TTG
Gln
>WENV182237173
OHRW01001143
280451
Bacteroidota
CGT
Thr
>WENV182237210
OHRW01001628
99847
Bacteroidota
GTA
Tyr
>WENV182237049
OHRW01000140
99847
Bacteroidota
GTA
Tyr
>WENV182236973
OHRW01000006
99847
Bacteroidota
GTA
Tyr
>WENV182237201
OHRW01001483
399200
Bacteroidota
CAT
Met
>WENV182237343
OHRW01006166
186874
Bacteroidota
CAT
Met
>WENV182236983
OHRW01000009
488746
Bacteroidota
CTG
Gln
>WENV182237317
OHRW01004930
399026
Bacteroidota
CCT
Arg
>WENV182237055
OHRW01000170
280478
Bacteroidota
GCC
Gly
>WENV182237039
OHRW01000107
175844
Bacteroidota
GGC
Ala
>WENV182237290
OHRW01003953
280532
Bacteroidota
>WENV182237044
OHRW01000127
73011
Bacteroidota
CAA
Leu
>WENV182237362
OHRW01010229
480318
Bacteroidota
CTG
Gln
>WENV182236982
OHRW01000009
158068
Bacteroidota
GGG
Pro
>WENV182237067
OHRW01000233
398828
Bacteroidota
CCG
Arg
>WENV182237006
OHRW01000038
74084
Bacteroidota
CAG
Leu
>WENV182237182
OHRW01001243
159415
Bacteroidota
TAC
Val
>WENV182237043
OHRW01000126
480325
Bacteroidota
CTG
Gln
>WENV182237032
OHRW01000083
176192
Bacteroidota
TCT
Arg
>WENV182237154
OHRW01000892
280446
Bacteroidota
TTT
Lys
>WENV182237122
OHRW01000474
484496
Bacteroidota
TTG
Gln
>WENV182237082
OHRW01000277
484496
Bacteroidota
TTG
Gln
>WENV182237148
OHRW01000792
285750
Bacteroidota
CCC
Gly
>WENV182237202
OHRW01001488
398836
Bacteroidota
GCA
Cys
>WENV182237197
OHRW01001418
398836
Bacteroidota
GCA
Cys
>WENV182237169
OHRW01001100
398836
Bacteroidota
GCA
Cys
>WENV182237014
OHRW01000049
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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