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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182239174
OHSA01006005
204388
Verrucomicrobiota
CAT
Met
>WENV182239037
OHSA01001678
406043
Verrucomicrobiota
GCA
Cys
>WENV182239124
OHSA01004120
406350
Verrucomicrobiota
TGT
Thr
>WENV182239147
OHSA01004986
293105
Verrucomicrobiota
CAT
Met
>WENV182239015
OHSA01001275
405901
Verrucomicrobiota
GCC
Gly
>WENV182239048
OHSA01001953
8960
Verrucomicrobiota
CGA
Ser
>WENV182239136
OHSA01004473
101463
Verrucomicrobiota
TAA
Leu
>WENV182239100
OHSA01003054
157427
Verrucomicrobiota
GTC
Asp
>WENV182239086
OHSA01002762
293079
Verrucomicrobiota
CGC
Ala
>WENV182239028
OHSA01001502
120352
Verrucomicrobiota
TAG
Leu
>WENV182239024
OHSA01001438
292636
Verrucomicrobiota
>WENV182239161
OHSA01005385
293069
Verrucomicrobiota
CTT
Lys
>WENV182239160
OHSA01005385
293069
Verrucomicrobiota
CTT
Lys
>WENV182239103
OHSA01003113
406336
Verrucomicrobiota
CCT
Arg
>WENV182239187
OHSA01006868
406369
Verrucomicrobiota
CCG
Arg
>WENV182239183
OHSA01006475
405940
Verrucomicrobiota
GGT
Thr
>WENV182239092
OHSA01002898
406044
Verrucomicrobiota
CTG
Gln
>WENV182239150
OHSA01005100
187556
Verrucomicrobiota
GGG
Pro
>WENV182239193
OHSA01007418
406037
Verrucomicrobiota
GTG
His
>WENV182239228
OHSA01010061
406360
Verrucomicrobiota
GAC
Val
>WENV182238976
OHSA01000774
187548
Verrucomicrobiota
TCT
Arg
>WENV182239093
OHSA01002919
406040
Verrucomicrobiota
CGT
Thr
>WENV182238972
OHSA01000704
57652
Verrucomicrobiota
TGA
Ser
>WENV182239244
OHSA01012054
406039
Verrucomicrobiota
CAC
Val
>WENV182239171
OHSA01005704
101461
Verrucomicrobiota
GTA
Tyr
>WENV182239109
OHSA01003354
293095
Verrucomicrobiota
TTT
Lys
>WENV182239113
OHSA01003519
187561
Verrucomicrobiota
CGG
Pro
>WENV182239019
OHSA01001340
406342
Verrucomicrobiota
CAT
Met
>WENV182239091
OHSA01002846
406351
Verrucomicrobiota
GTT
Asn
>WENV182239148
OHSA01004987
406346
Verrucomicrobiota
TAC
Val
>WENV182239201
OHSA01007738
8938
Verrucomicrobiota
GCT
Ser
>WENV182238913
OHSA01000256
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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