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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182243992
OHSI01012291
293125
Verrucomicrobiota
GAA
Phe
>WENV182244004
OHSI01013057
148006
Verrucomicrobiota
CAA
Leu
>WENV182244233
OHSI01046057
405901
Verrucomicrobiota
GCC
Gly
>WENV182244061
OHSI01016747
8960
Verrucomicrobiota
CGA
Ser
>WENV182243991
OHSI01012281
157427
Verrucomicrobiota
GTC
Asp
>WENV182244125
OHSI01022305
293079
Verrucomicrobiota
CGC
Ala
>WENV182244227
OHSI01044459
298263
Verrucomicrobiota
TTC
Glu
>WENV182244113
OHSI01021316
293069
Verrucomicrobiota
CTT
Lys
>WENV182244112
OHSI01021316
293069
Verrucomicrobiota
CTT
Lys
>WENV182244070
OHSI01017798
406369
Verrucomicrobiota
CCG
Arg
>WENV182244137
OHSI01023903
405940
Verrucomicrobiota
GGT
Thr
>WENV182244044
OHSI01016221
406044
Verrucomicrobiota
CTG
Gln
>WENV182244243
OHSI01047242
406360
Verrucomicrobiota
GAC
Val
>WENV182244188
OHSI01034053
187548
Verrucomicrobiota
TCT
Arg
>WENV182244111
OHSI01021316
406040
Verrucomicrobiota
CGT
Thr
>WENV182243983
OHSI01011592
406039
Verrucomicrobiota
CAC
Val
>WENV182244071
OHSI01017875
406342
Verrucomicrobiota
CAT
Met
>WENV182244066
OHSI01017556
406351
Verrucomicrobiota
GTT
Asn
>WENV182244239
OHSI01047068
303305
Verrucomicrobiota
GGC
Ala
>WENV182244047
OHSI01016330
406346
Verrucomicrobiota
TAC
Val
>WENV182244062
OHSI01016970
8938
Verrucomicrobiota
GCT
Ser
>WENV182243993
OHSI01012291
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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