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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182252391
OHSX01029957
343590
Bacillota
GCC
Gly
>WENV182252339
OHSX01019820
234991
Bacillota
GAT
Ile
>WENV182252366
OHSX01025151
405363
Bacillota
GCA
Cys
>WENV182252200
OHSX01004979
175842
Bacillota
CAC
Val
>WENV182252205
OHSX01005162
291629
Bacillota
CCA
Trp
>WENV182252287
OHSX01012152
236579
Bacillota
GAT
Ile
>WENV182251935
OHSX01000088
348419
Bacillota
GTT
Asn
>WENV182252159
OHSX01003248
190476
Bacillota
CAT
Met
>WENV182252357
OHSX01023673
73664
Bacillota
CAG
Leu
>WENV182252278
OHSX01010358
5692
Bacillota
GCT
Ser
>WENV182252115
OHSX01002004
312274
Bacillota
GGC
Ala
>WENV182252132
OHSX01002544
186123
Bacillota
GTC
Asp
>WENV182252055
OHSX01000983
284723
Bacillota
TAC
Val
>WENV182252141
OHSX01002726
73009
Bacillota
CAG
Leu
>WENV182252175
OHSX01003717
291581
Bacillota
CGG
Pro
>WENV182252113
OHSX01001953
175859
Bacillota
TCT
Arg
>WENV182251995
OHSX01000444
175831
Bacillota
ACG
Arg
>WENV182252355
OHSX01022766
284627
Bacillota
GAA
Phe
>WENV182252133
OHSX01002544
291634
Bacillota
GAA
Phe
>WENV182252369
OHSX01025748
346451
Bacillota
TTT
Lys
>WENV182252174
OHSX01003717
480322
Bacillota
CTG
Gln
>WENV182252242
OHSX01007957
175868
Bacillota
GTT
Asn
>WENV182252214
OHSX01005821
322848
Bacillota
CTT
Lys
>WENV182252213
OHSX01005821
398854
Bacillota
CTC
Glu
>WENV182252087
OHSX01001339
291576
Bacillota
CCC
Gly
>WENV182252060
OHSX01001055
480324
Bacillota
TTG
Gln
>WENV182252274
OHSX01010179
303718
Bacillota
TGT
Thr
>WENV182252288
OHSX01012184
56079
Bacillota
AAG
Leu
>WENV182252201
OHSX01005003
323864
Bacillota
TGC
Ala
>WENV182252154
OHSX01003103
280444
Bacillota
GGT
Thr
>WENV182252292
OHSX01013503
46643
Bacillota
TGA
Ser
>WENV182252171
OHSX01003653
179755
Bacillota
CCG
Arg
>WENV182252340
OHSX01019820
291650
Bacillota
TGC
Ala
>WENV182252208
OHSX01005473
46835
Bacillota
TAA
Leu
>WENV182252280
OHSX01010491
398852
Bacillota
CTC
Glu
>WENV182251964
OHSX01000211
175857
Bacillota
GTG
His
>WENV182252245
OHSX01008060
285756
Bacillota
GCC
Gly
>WENV182252284
OHSX01011231
398833
Bacillota
TGT
Thr
>WENV182252153
OHSX01003103
175849
Bacillota
GTC
Asp
>WENV182252157
OHSX01003174
280463
Bacillota
TTT
Lys
>WENV182252353
OHSX01021851
280486
Bacillota
TGC
Ala
>WENV182252204
OHSX01005162
405393
Bacillota
GCC
Gly
>WENV182252277
OHSX01010358
56074
Bacillota
TGA
Ser
>WENV182252299
OHSX01014101
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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