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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182258135
OHTG01004588
99852
Bacillota
GTA
Tyr
>WENV182257785
OHTG01000265
343590
Bacillota
GCC
Gly
>WENV182258179
OHTG01006453
405363
Bacillota
GCA
Cys
>WENV182257952
OHTG01000984
280428
Bacillota
GAA
Phe
>WENV182257866
OHTG01000457
280492
Bacillota
CTT
Lys
>WENV182258183
OHTG01006546
179563
Bacillota
GAT
Ile
>WENV182258182
OHTG01006546
295166
Bacillota
TGC
Ala
>WENV182257814
OHTG01000330
82124
Bacillota
TAA
Leu
>WENV182258043
OHTG01001895
73664
Bacillota
CAG
Leu
>WENV182257925
OHTG01000765
73664
Bacillota
CAG
Leu
>WENV182258033
OHTG01001789
280447
Bacillota
GAC
Val
>WENV182257967
OHTG01001105
73009
Bacillota
CAG
Leu
>WENV182258072
OHTG01002555
481217
Bacillota
GCA
Cys
>WENV182258202
OHTG01007256
189473
Bacillota
GAT
Ile
>WENV182258321
OHTG01016580
291581
Bacillota
CGG
Pro
>WENV182258252
OHTG01009754
21311
Bacillota
GCT
Ser
>WENV182258028
OHTG01001635
175831
Bacillota
ACG
Arg
>WENV182257847
OHTG01000404
284627
Bacillota
GAA
Phe
>WENV182257793
OHTG01000284
284627
Bacillota
GAA
Phe
>WENV182258320
OHTG01016580
480322
Bacillota
CTG
Gln
>WENV182258053
OHTG01001939
480322
Bacillota
CTG
Gln
>WENV182257742
OHTG01000137
187364
Bacillota
CAT
Met
>WENV182258015
OHTG01001468
175868
Bacillota
GTT
Asn
>WENV182258021
OHTG01001540
322848
Bacillota
CTT
Lys
>WENV182258020
OHTG01001540
398854
Bacillota
CTC
Glu
>WENV182258172
OHTG01006082
291576
Bacillota
CCC
Gly
>WENV182258234
OHTG01008778
480324
Bacillota
TTG
Gln
>WENV182257951
OHTG01000976
497729
Bacillota
CCA
Trp
>WENV182258316
OHTG01016459
73638
Bacillota
AAG
Leu
>WENV182258042
OHTG01001895
56079
Bacillota
AAG
Leu
>WENV182258473
OHTG01047361
323864
Bacillota
TGC
Ala
>WENV182258482
OHTG01050171
186051
Bacillota
GAT
Ile
>WENV182257998
OHTG01001326
204381
Bacillota
GAT
Ile
>WENV182257868
OHTG01000460
117745
Bacillota
GTA
Tyr
>WENV182258152
OHTG01005176
280444
Bacillota
GGT
Thr
>WENV182258100
OHTG01003267
280444
Bacillota
GGT
Thr
>WENV182257894
OHTG01000540
483485
Bacillota
CCC
Gly
>WENV182258107
OHTG01003480
179755
Bacillota
CCG
Arg
>WENV182257758
OHTG01000180
118669
Bacillota
GTA
Tyr
>WENV182257870
OHTG01000460
280462
Bacillota
GAA
Phe
>WENV182258039
OHTG01001856
398852
Bacillota
CTC
Glu
>WENV182258038
OHTG01001856
398852
Bacillota
CTC
Glu
>WENV182258035
OHTG01001823
398852
Bacillota
CTC
Glu
>WENV182257851
OHTG01000411
398852
Bacillota
CTC
Glu
>WENV182257727
OHTG01000107
280483
Bacillota
GAA
Phe
>WENV182257645
OHTG01000002
406186
Bacillota
CTC
Glu
>WENV182258070
OHTG01002535
285601
Bacillota
TTC
Glu
>WENV182257728
OHTG01000107
285756
Bacillota
GCC
Gly
>WENV182258383
OHTG01026777
398833
Bacillota
TGT
Thr
>WENV182258151
OHTG01005176
175849
Bacillota
GTC
Asp
>WENV182258253
OHTG01009764
179166
Bacillota
TCT
Arg
>WENV182258056
OHTG01002042
56074
Bacillota
TGA
Ser
>WENV182258115
OHTG01003756
280473
Bacillota
TGG
Pro
>WENV182258068
OHTG01002414
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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