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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182259660
OHTI01000129
289031
Bacteroidota
CAT
Met
>WENV182259678
OHTI01000154
280557
Bacteroidota
CAT
Met
>WENV182259578
OHTI01000053
351598
Bacteroidota
CGG
Pro
>WENV182259641
OHTI01000115
398872
Bacteroidota
GGT
Thr
>WENV182259764
OHTI01000313
169545
Bacteroidota
TGG
Pro
>WENV182260002
OHTI01008437
178571
Bacteroidota
GTT
Asn
>WENV182259566
OHTI01000042
175936
Bacteroidota
CAT
Met
>WENV182260008
OHTI01009176
172085
Bacteroidota
TAC
Val
>WENV182259826
OHTI01000612
179697
Bacteroidota
TGT
Thr
>WENV182259704
OHTI01000196
398860
Bacteroidota
CTC
Glu
>WENV182259729
OHTI01000251
480404
Bacteroidota
TTG
Gln
>WENV182259736
OHTI01000264
99847
Bacteroidota
GTA
Tyr
>WENV182259551
OHTI01000021
27524
Bacteroidota
GGA
Ser
>WENV182259601
OHTI01000073
280532
Bacteroidota
>WENV182259545
OHTI01000014
229246
Bacteroidota
GGC
Ala
>WENV182259950
OHTI01003151
187814
Bacteroidota
GTC
Asp
>WENV182259737
OHTI01000270
183889
Bacteroidota
GGC
Ala
>WENV182259626
OHTI01000099
480318
Bacteroidota
CTG
Gln
>WENV182259939
OHTI01002852
178134
Bacteroidota
TGG
Pro
>WENV182259924
OHTI01002363
481044
Bacteroidota
>WENV182259553
OHTI01000025
176192
Bacteroidota
TCT
Arg
>WENV182259567
OHTI01000043
69204
Bacteroidota
TGA
Ser
>WENV182259548
OHTI01000017
69204
Bacteroidota
TGA
Ser
>WENV182259533
OHTI01000006
117804
Bacteroidota
TAG
Leu
>WENV182259558
OHTI01000034
365112
Bacteroidota
TTT
Lys
>WENV182259556
OHTI01000033
365112
Bacteroidota
TTT
Lys
>WENV182259549
OHTI01000017
398836
Bacteroidota
GCA
Cys
>WENV182259735
OHTI01000263
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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