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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182263738
OHTT01012813
405363
Bacillota
GCA
Cys
>WENV182263591
OHTT01001571
280428
Bacillota
GAA
Phe
>WENV182263676
OHTT01005576
291579
Bacillota
GAA
Phe
>WENV182263493
OHTT01000394
280466
Bacillota
TAC
Val
>WENV182263429
OHTT01000197
280492
Bacillota
CTT
Lys
>WENV182263440
OHTT01000241
280492
Bacillota
CTT
Lys
>WENV182263621
OHTT01002598
175842
Bacillota
CAC
Val
>WENV182263673
OHTT01005301
179563
Bacillota
GAT
Ile
>WENV182263672
OHTT01005301
295166
Bacillota
TGC
Ala
>WENV182263610
OHTT01002260
190476
Bacillota
CAT
Met
>WENV182263388
OHTT01000101
73664
Bacillota
CAG
Leu
>WENV182263579
OHTT01001206
280447
Bacillota
GAC
Val
>WENV182263552
OHTT01000817
5692
Bacillota
GCT
Ser
>WENV182263526
OHTT01000633
73009
Bacillota
CAG
Leu
>WENV182263650
OHTT01004106
481217
Bacillota
GCA
Cys
>WENV182263539
OHTT01000779
175859
Bacillota
TCT
Arg
>WENV182263758
OHTT01016394
398835
Bacillota
GCC
Gly
>WENV182263523
OHTT01000603
175831
Bacillota
ACG
Arg
>WENV182263651
OHTT01004254
480322
Bacillota
CTG
Gln
>WENV182263770
OHTT01021564
187364
Bacillota
CAT
Met
>WENV182263474
OHTT01000321
175868
Bacillota
GTT
Asn
>WENV182263496
OHTT01000394
119278
Bacillota
TAG
Leu
>WENV182263710
OHTT01008967
322848
Bacillota
CTT
Lys
>WENV182263473
OHTT01000321
398854
Bacillota
CTC
Glu
>WENV182263537
OHTT01000752
291576
Bacillota
CCC
Gly
>WENV182263731
OHTT01011945
400963
Bacillota
GTT
Asn
>WENV182263663
OHTT01004966
175899
Bacillota
GTC
Asp
>WENV182263811
OHTT01033033
73638
Bacillota
AAG
Leu
>WENV182263428
OHTT01000187
56079
Bacillota
AAG
Leu
>WENV182263387
OHTT01000101
56079
Bacillota
AAG
Leu
>WENV182263791
OHTT01025075
292374
Bacillota
TGC
Ala
>WENV182263395
OHTT01000114
117745
Bacillota
GTA
Tyr
>WENV182263589
OHTT01001440
280444
Bacillota
GGT
Thr
>WENV182263577
OHTT01001163
280444
Bacillota
GGT
Thr
>WENV182263456
OHTT01000297
46643
Bacillota
TGA
Ser
>WENV182263553
OHTT01000832
179755
Bacillota
CCG
Arg
>WENV182263788
OHTT01024774
58120
Bacillota
AAG
Leu
>WENV182263753
OHTT01014928
46835
Bacillota
TAA
Leu
>WENV182263611
OHTT01002260
398832
Bacillota
TTC
Glu
>WENV182263414
OHTT01000149
280462
Bacillota
GAA
Phe
>WENV182263505
OHTT01000417
398852
Bacillota
CTC
Glu
>WENV182263459
OHTT01000302
398852
Bacillota
CTC
Glu
>WENV182263419
OHTT01000157
398852
Bacillota
CTC
Glu
>WENV182263383
OHTT01000093
398852
Bacillota
CTC
Glu
>WENV182263790
OHTT01025075
201856
Bacillota
GAT
Ile
>WENV182263366
OHTT01000062
175857
Bacillota
GTG
His
>WENV182263693
OHTT01007048
398833
Bacillota
TGT
Thr
>WENV182263576
OHTT01001163
175849
Bacillota
GTC
Asp
>WENV182263368
OHTT01000062
280463
Bacillota
TTT
Lys
>WENV182263551
OHTT01000817
56074
Bacillota
TGA
Ser
>WENV182263574
OHTT01001146
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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