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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182264653
OHTV01000158
117741
Bacteroidota
TAG
Leu
>WENV182264613
OHTV01000081
398829
Bacteroidota
CCT
Arg
>WENV182264623
OHTV01000101
175838
Bacteroidota
GTT
Asn
>WENV182265053
OHTV01017439
404226
Bacteroidota
CCT
Arg
>WENV182264925
OHTV01004216
175904
Bacteroidota
CGG
Pro
>WENV182264530
OHTV01000013
400161
Bacteroidota
GGT
Thr
>WENV182264855
OHTV01001943
289031
Bacteroidota
CAT
Met
>WENV182264710
OHTV01000284
156422
Bacteroidota
TAC
Val
>WENV182264549
OHTV01000020
280557
Bacteroidota
CAT
Met
>WENV182264569
OHTV01000052
20206
Bacteroidota
GGA
Ser
>WENV182264903
OHTV01003287
483416
Bacteroidota
CTG
Gln
>WENV182264982
OHTV01008193
398871
Bacteroidota
TTC
Glu
>WENV182264505
OHTV01000001
118221
Bacteroidota
CAA
Leu
>WENV182264888
OHTV01002790
56493
Bacteroidota
TGA
Ser
>WENV182265060
OHTV01018571
175906
Bacteroidota
GTG
His
>WENV182264562
OHTV01000045
175903
Bacteroidota
GTG
His
>WENV182265099
OHTV01025891
156068
Bacteroidota
TAC
Val
>WENV182265045
OHTV01016300
175908
Bacteroidota
GTC
Asp
>WENV182264552
OHTV01000023
56385
Bacteroidota
TGA
Ser
>WENV182264531
OHTV01000013
312035
Bacteroidota
CCA
Trp
>WENV182264756
OHTV01000525
242241
Bacteroidota
GTC
Asp
>WENV182264755
OHTV01000525
242241
Bacteroidota
GTC
Asp
>WENV182264744
OHTV01000475
57807
Bacteroidota
TGA
Ser
>WENV182264880
OHTV01002458
175902
Bacteroidota
GGC
Ala
>WENV182264823
OHTV01001154
280451
Bacteroidota
CGT
Thr
>WENV182264664
OHTV01000182
99847
Bacteroidota
GTA
Tyr
>WENV182265046
OHTV01016315
399200
Bacteroidota
CAT
Met
>WENV182265009
OHTV01010728
399200
Bacteroidota
CAT
Met
>WENV182264658
OHTV01000162
404109
Bacteroidota
CTC
Glu
>WENV182264657
OHTV01000162
404109
Bacteroidota
CTC
Glu
>WENV182264866
OHTV01002262
186874
Bacteroidota
CAT
Met
>WENV182264718
OHTV01000303
46648
Bacteroidota
TAA
Leu
>WENV182264681
OHTV01000208
332896
Bacteroidota
TTT
Lys
>WENV182264568
OHTV01000052
488746
Bacteroidota
CTG
Gln
>WENV182265124
OHTV01034638
280478
Bacteroidota
GCC
Gly
>WENV182264608
OHTV01000079
158068
Bacteroidota
GGG
Pro
>WENV182264642
OHTV01000138
398828
Bacteroidota
CCG
Arg
>WENV182264991
OHTV01008566
480325
Bacteroidota
CTG
Gln
>WENV182264557
OHTV01000029
481328
Bacteroidota
TTG
Gln
>WENV182264769
OHTV01000591
484496
Bacteroidota
TTG
Gln
>WENV182264979
OHTV01008074
285750
Bacteroidota
CCC
Gly
>WENV182265050
OHTV01016725
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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