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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182266276
OHTY01001294
295385
Bacteroidota
CCA
Trp
>WENV182266184
OHTY01000037
117741
Bacteroidota
TAG
Leu
>WENV182266225
OHTY01000143
398829
Bacteroidota
CCT
Arg
>WENV182266249
OHTY01000302
175838
Bacteroidota
GTT
Asn
>WENV182266654
OHTY01036343
175904
Bacteroidota
CGG
Pro
>WENV182266355
OHTY01003611
400161
Bacteroidota
GGT
Thr
>WENV182266189
OHTY01000043
280557
Bacteroidota
CAT
Met
>WENV182266165
OHTY01000010
20206
Bacteroidota
GGA
Ser
>WENV182266176
OHTY01000021
175903
Bacteroidota
GTG
His
>WENV182266418
OHTY01006717
280530
Bacteroidota
CCA
Trp
>WENV182266617
OHTY01024876
178907
Bacteroidota
TCT
Arg
>WENV182266463
OHTY01009195
20449
Bacteroidota
GGA
Ser
>WENV182266586
OHTY01020444
178133
Bacteroidota
GAT
Ile
>WENV182266267
OHTY01000716
57807
Bacteroidota
TGA
Ser
>WENV182266181
OHTY01000029
57807
Bacteroidota
TGA
Ser
>WENV182266545
OHTY01016905
175886
Bacteroidota
GGC
Ala
>WENV182266175
OHTY01000018
175902
Bacteroidota
GGC
Ala
>WENV182266173
OHTY01000016
280451
Bacteroidota
CGT
Thr
>WENV182266186
OHTY01000040
99847
Bacteroidota
GTA
Tyr
>WENV182266455
OHTY01008613
399200
Bacteroidota
CAT
Met
>WENV182266475
OHTY01010351
186874
Bacteroidota
CAT
Met
>WENV182266164
OHTY01000010
488746
Bacteroidota
CTG
Gln
>WENV182266508
OHTY01013958
280478
Bacteroidota
GCC
Gly
>WENV182266413
OHTY01006546
175844
Bacteroidota
GGC
Ala
>WENV182266498
OHTY01012564
73011
Bacteroidota
CAA
Leu
>WENV182266563
OHTY01018417
187814
Bacteroidota
GTC
Asp
>WENV182266669
OHTY01039713
178134
Bacteroidota
TGG
Pro
>WENV182266146
OHTY01000001
158068
Bacteroidota
GGG
Pro
>WENV182266354
OHTY01003611
118220
Bacteroidota
GTA
Tyr
>WENV182266148
OHTY01000002
398828
Bacteroidota
CCG
Arg
>WENV182266441
OHTY01008012
481044
Bacteroidota
>WENV182266509
OHTY01013958
74084
Bacteroidota
CAG
Leu
>WENV182266435
OHTY01007200
159415
Bacteroidota
TAC
Val
>WENV182266190
OHTY01000046
176192
Bacteroidota
TCT
Arg
>WENV182266233
OHTY01000218
280446
Bacteroidota
TTT
Lys
>WENV182266147
OHTY01000001
280446
Bacteroidota
TTT
Lys
>WENV182266607
OHTY01023495
484496
Bacteroidota
TTG
Gln
>WENV182266201
OHTY01000072
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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